RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 PTGISQ16647 500 aa22.62■■□□□ 1.21
TSPAN3-210ENST00000561277 INF2Q27J81 1249 aa22.62■■□□□ 1.21
TSPAN3-210ENST00000561277 SESTD1Q86VW0 696 aa22.62■■□□□ 1.21
TSPAN3-210ENST00000561277 BRMS1Q9HCU9 246 aa22.62■■□□□ 1.21
TSPAN3-210ENST00000561277 TDP2O95551 362 aa22.61■■□□□ 1.21
TSPAN3-210ENST00000561277 KRT2P35908 639 aa22.61■■□□□ 1.21
TSPAN3-210ENST00000561277 FPGSQ05932 587 aa22.61■■□□□ 1.21
TSPAN3-210ENST00000561277 NR5A1Q13285 461 aa22.61■■□□□ 1.21
TSPAN3-210ENST00000561277 PIK3AP1Q6ZUJ8 805 aa22.61■■□□□ 1.21
TSPAN3-210ENST00000561277 LENG9Q96B70 501 aa22.61■■□□□ 1.21
TSPAN3-210ENST00000561277 NOC4LQ9BVI4 516 aaKnown RBP22.61■■□□□ 1.21
TSPAN3-210ENST00000561277 CCL23P55773 120 aa22.6■■□□□ 1.21
TSPAN3-210ENST00000561277 ACTR2P61160 394 aa22.6■■□□□ 1.21
TSPAN3-210ENST00000561277 GUCY1B3Q02153 619 aa22.6■■□□□ 1.21
TSPAN3-210ENST00000561277 MFSD5Q6N075 450 aa22.6■■□□□ 1.21
TSPAN3-210ENST00000561277 GLG1Q92896 1179 aa22.6■■□□□ 1.21
TSPAN3-210ENST00000561277 MMP1P03956 469 aa22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 SMIM10L2AP0DMW4 78 aa22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 SMIM10L2BP0DMW5 78 aa22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 MARK3P27448 753 aa22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 LETM2Q2VYF4 491 aa22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 KRT40Q6A162 431 aa22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 TDHQ8IZJ6 230 aa22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 FAM184AQ8NB25 1140 aa22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 TMX3Q96JJ7 454 aa22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 CSF2RAP15509 400 aa22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 HMGN5P82970 282 aaKnown RBP22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 ZNF200P98182 395 aaPredicted RBP22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 DIS3L2Q8IYB7 885 aaKnown RBP22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 TMEM199Q8N511 208 aa22.59■■□□□ 1.21
TSPAN3-210ENST00000561277 A0A1W2PPC1 479 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 MSH4O15457 936 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 DHX15O43143 795 aaKnown RBP22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 CCNE2O96020 404 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 EPHB4P54760 987 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 HIC1Q14526 733 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 EARS2Q5JPH6 523 aaKnown RBP22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 NEK8Q86SG6 692 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 IL27Q8NEV9 243 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 C8orf76Q96K31 380 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 CTAGE1Q96RT6 745 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 WNT8AQ9H1J5 351 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 RNPEPQ9H4A4 650 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 AZI2Q9H6S1 392 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 TBC1D22BQ9NU19 505 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 ERAP1Q9NZ08 941 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 TCEAL9Q9UHQ7 104 aa22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 LAMA2P24043 3122 aaKnown RBP22.58■■□□□ 1.2
TSPAN3-210ENST00000561277 EMSYQ7Z589 1322 aa22.57■■□□□ 1.2
TSPAN3-210ENST00000561277 C17orf102A2RUQ5 167 aa22.57■■□□□ 1.2
TSPAN3-210ENST00000561277 FAM205CA6NFA0 338 aa22.57■■□□□ 1.2
TSPAN3-210ENST00000561277 BTBD18B2RXH4 712 aa22.57■■□□□ 1.2
TSPAN3-210ENST00000561277 MCM2P49736 904 aa22.57■■□□□ 1.2
TSPAN3-210ENST00000561277 SCLYQ96I15 445 aa22.57■■□□□ 1.2
TSPAN3-210ENST00000561277 PCYT2Q99447 389 aa22.57■■□□□ 1.2
TSPAN3-210ENST00000561277 SMARCAD1Q9H4L7 1026 aa22.57■■□□□ 1.2
TSPAN3-210ENST00000561277 DDX25Q9UHL0 483 aaKnown RBP22.57■■□□□ 1.2
TSPAN3-210ENST00000561277 PPIGQ13427 754 aaKnown RBP eCLIP22.56■■□□□ 1.2
TSPAN3-210ENST00000561277 Q4G0T1 1027 aa22.56■■□□□ 1.2
TSPAN3-210ENST00000561277 C9orf50Q5SZB4 431 aa22.56■■□□□ 1.2
TSPAN3-210ENST00000561277 GJA10Q969M2 543 aa22.56■■□□□ 1.2
TSPAN3-210ENST00000561277 SETD4Q9NVD3 440 aa22.56■■□□□ 1.2
TSPAN3-210ENST00000561277 BACH1O14867 736 aa22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 LGR5O75473 907 aa22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 SHHQ15465 462 aa22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 MOXD1Q6UVY6 613 aa22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 DHX38Q92620 1227 aaKnown RBP22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 TNFRSF25Q93038 417 aa22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 CYP3A7-CYP3A51PA0A087WV96 503 aa22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 SLC37A4O43826 429 aa22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 CCNT1O60563 726 aaKnown RBP22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 CYP3A7P24462 503 aa22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 SAFBQ15424 915 aaKnown RBP eCLIP22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 CCDC155Q8N6L0 562 aa22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 RETREG2Q8NC44 543 aa22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 ATP6V0A1Q93050 837 aa22.55■■□□□ 1.2
TSPAN3-210ENST00000561277 PITPNM1O00562 1244 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 TREHO43280 583 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 CHMP2AO43633 222 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 GAS7O60861 476 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 ATG7O95352 703 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 ACRP10323 421 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 STAT5BP51692 787 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 KRT76Q01546 638 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 BFSP2Q13515 415 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 LRCH2Q5VUJ6 765 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 ZNF746Q6NUN9 644 aaPredicted RBP22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 MIS18BP1Q6P0N0 1132 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 ABHD15Q6UXT9 468 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 CCDC60Q8IWA6 550 aaPredicted RBP22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 SLC5A5Q92911 643 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 WNT8BQ93098 351 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 MBOAT7Q96N66 472 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 TEKT3Q9BXF9 490 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 SAMM50Q9Y512 469 aa22.54■■□□□ 1.2
TSPAN3-210ENST00000561277 TRIP12Q14669 1992 aaPredicted RBP22.53■■□□□ 1.2
TSPAN3-210ENST00000561277 GNAT1P11488 350 aa22.53■■□□□ 1.2
TSPAN3-210ENST00000561277 HOXC8P31273 242 aa22.53■■□□□ 1.2
TSPAN3-210ENST00000561277 PPFIA1Q13136 1202 aa22.53■■□□□ 1.2
TSPAN3-210ENST00000561277 PTK7Q13308 1070 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms