RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 PTK7Q13308 1070 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 BFSP2Q13515 415 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 MBTPS1Q14703 1052 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 MFSD10Q14728 455 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 RABEP1Q15276 862 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 RAB30Q15771 203 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 KIAA0753Q2KHM9 967 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 WWC2Q6AWC2 1192 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 USP17L6PQ6QN14 398 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 SERINC5Q86VE9 423 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 DHX37Q8IY37 1157 aaKnown RBP7.9□□□□□ -1.14
SPG11-224ENST00000561268 RPUSD2Q8IZ73 545 aaKnown RBP7.9□□□□□ -1.14
SPG11-224ENST00000561268 CCDC155Q8N6L0 562 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 WNT8BQ93098 351 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 TIFAQ96CG3 184 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 SLC9A7Q96T83 725 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 LRRC2Q9BYS8 371 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 ZNF576Q9H609 170 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 HDAC6Q9UBN7 1215 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 SEC63Q9UGP8 760 aaKnown RBP7.9□□□□□ -1.14
SPG11-224ENST00000561268 YBX2Q9Y2T7 364 aaKnown RBP7.9□□□□□ -1.14
SPG11-224ENST00000561268 PCDHA11Q9Y5I1 949 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 UBIAD1Q9Y5Z9 338 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 SLC12A7Q9Y666 1083 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 TTC28Q96AY4 2481 aa7.9□□□□□ -1.15
SPG11-224ENST00000561268 VCANP13611 3396 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 GRXCR1A8MXD5 290 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 STXBP3O00186 592 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 FGBP02675 491 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 CKBP12277 381 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 MYCLP12524 364 aaPredicted RBP7.89□□□□□ -1.15
SPG11-224ENST00000561268 SELPP16109 830 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 ITGB5P18084 799 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 CDC27P30260 824 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 NEDD9Q14511 834 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 GRIN2CQ14957 1233 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 PTGISQ16647 500 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 RTN1Q16799 776 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 FAM47CQ5HY64 1035 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 LRRC8DQ7L1W4 858 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 RPAINQ86UA6 219 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 FCHSD1Q86WN1 690 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 MAFAQ8NHW3 353 aaPredicted RBP7.89□□□□□ -1.15
SPG11-224ENST00000561268 MYLIPQ8WY64 445 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 SPATA33Q96N06 139 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 GPR20Q99678 358 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 BCAS3Q9H6U6 928 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 RIC8AQ9NPQ8 531 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 SNX14Q9Y5W7 946 aa7.89□□□□□ -1.15
SPG11-224ENST00000561268 MUC3AQ02505 3323 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 NFASCO94856 1347 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 GOLGA6L3A6NEY3 463 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 H3BRB1 525 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 ZBTB43O43298 467 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 NBNO60934 754 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 LGR5O75473 907 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 POU3F3P20264 500 aaPredicted RBP7.88□□□□□ -1.15
SPG11-224ENST00000561268 SREBF1P36956 1147 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 MCM2P49736 904 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 WDR5P61964 334 aaKnown RBP7.88□□□□□ -1.15
SPG11-224ENST00000561268 AP3B2Q13367 1082 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 NTRK3Q16288 839 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 UBE2SQ16763 222 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 TCTN1Q2MV58 587 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 CNKSR3Q6P9H4 555 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 NFXL1Q6ZNB6 911 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 OTOP2Q7RTS6 562 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 TRIM50Q86XT4 487 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 ZNF687Q8N1G0 1237 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 CMTR1Q8N1G2 835 aaKnown RBP7.88□□□□□ -1.15
SPG11-224ENST00000561268 GIMAP8Q8ND71 665 aaPredicted RBP7.88□□□□□ -1.15
SPG11-224ENST00000561268 SMARCC2Q8TAQ2 1214 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 PHOSPHO2Q8TCD6 241 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 PPP1R13LQ8WUF5 828 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 CUL5Q93034 780 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 CDHR1Q96JP9 859 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 TCEANC2Q96MN5 208 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 FAM161BQ96MY7 647 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 USP26Q9BXU7 913 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 TUT1Q9H6E5 874 aaKnown RBP7.88□□□□□ -1.15
SPG11-224ENST00000561268 PSTPIP2Q9H939 334 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 BARHL2Q9NY43 387 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 TELO2Q9Y4R8 837 aa7.88□□□□□ -1.15
SPG11-224ENST00000561268 SPTBN5Q9NRC6 3674 aaKnown RBP7.88□□□□□ -1.15
SPG11-224ENST00000561268 MYO7AQ13402 2215 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 KLF18A0A0U1RQI7 1052 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 MBLAC1A4D2B0 266 aaPredicted RBP7.87□□□□□ -1.15
SPG11-224ENST00000561268 GOLGA8AA7E2F4 631 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 GOLGA8BA8MQT2 603 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 GOLGA6L22H0YM25 854 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 K7ELQ4 463 aaPredicted RBP7.87□□□□□ -1.15
SPG11-224ENST00000561268 MAFGO15525 162 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 REC8O95072 547 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 SMIM10L2AP0DMW4 78 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 SMIM10L2BP0DMW5 78 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 ACTN1P12814 892 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 FOSL2P15408 326 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 ATP2A2P16615 1042 aaKnown RBP7.87□□□□□ -1.15
SPG11-224ENST00000561268 RPS6KB1P23443 525 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 NUCB2P80303 420 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms