RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 KCNA1Q09470 495 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 ENOX2Q16206 610 aaKnown RBP11.69□□□□□ -0.54
TPM1-210ENST00000558264 DALRD3Q5D0E6 543 aaKnown RBP11.69□□□□□ -0.54
TPM1-210ENST00000558264 CCDC122Q5T0U0 273 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 RRAGAQ7L523 313 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 KIAA1328Q86T90 577 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 CHURC1Q8WUH1 139 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 ZNHIT6Q9NWK9 470 aaKnown RBP11.69□□□□□ -0.54
TPM1-210ENST00000558264 HDAC6Q9UBN7 1215 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 COL4A3BPQ9Y5P4 624 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 PSME4Q14997 1843 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 LRRC53A6NM62 1247 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 NFKBIEO00221 500 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 CIITAP33076 1130 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 FKBP3Q00688 224 aaKnown RBP11.69□□□□□ -0.54
TPM1-210ENST00000558264 KSR1Q8IVT5 923 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 FAM20AQ96MK3 541 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 PGAP2Q9UHJ9 254 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 CCPG1Q9ULG6 757 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 MACROD2A1Z1Q3 448 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 CTAGE9A4FU28 777 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 PIK3CDO00329 1044 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 SEC31AO94979 1220 aaKnown RBP11.68□□□□□ -0.54
TPM1-210ENST00000558264 CLCN6P51797 869 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 IL31RAQ8NI17 732 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 HOOK2Q96ED9 719 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 KCTD10Q9H3F6 313 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 RAVER2Q9HCJ3 691 aaKnown RBP11.68□□□□□ -0.54
TPM1-210ENST00000558264 COL20A1Q9P218 1284 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 WRAP73Q9P2S5 460 aaPredicted RBP11.68□□□□□ -0.54
TPM1-210ENST00000558264 RABGAP1Q9Y3P9 1069 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 ZNF263O14978 683 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 TBX3O15119 743 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 GAS7O60861 476 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 ASNSP08243 561 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 ALAS1P13196 640 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 KCNMA1Q12791 1236 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 ADAM9Q13443 819 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 MEA1Q16626 185 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 OTOP1Q7RTM1 612 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 FAM83AQ86UY5 434 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 SYT2Q8N9I0 419 aaPredicted RBP11.68□□□□□ -0.54
TPM1-210ENST00000558264 PURBQ96QR8 312 aaKnown RBP11.68□□□□□ -0.54
TPM1-210ENST00000558264 SH2D3AQ9BRG2 576 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 NUP58Q9BVL2 599 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 GTPBP4Q9BZE4 634 aaKnown RBP11.68□□□□□ -0.54
TPM1-210ENST00000558264 ARHGAP20Q9P2F6 1191 aa11.68□□□□□ -0.54
TPM1-210ENST00000558264 EFCAB8A8MWE9 144 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 CLIC2O15247 247 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 SRGAP2O75044 1071 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 GCNT3O95395 438 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 FGFR1OPO95684 399 aaKnown RBP11.67□□□□□ -0.54
TPM1-210ENST00000558264 NR2F2P24468 414 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 HOXD13P35453 343 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 ARID5AQ03989 594 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 MAEAQ7L5Y9 396 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 MICALL2Q8IY33 904 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 BANK1Q8NDB2 785 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 JAKMIP2Q96AA8 810 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 ZNF577Q9BSK1 485 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 MRPL11Q9Y3B7 192 aaKnown RBP11.67□□□□□ -0.54
TPM1-210ENST00000558264 PHF20L1A8MW92 1017 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 ZNF536O15090 1300 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 SLITRK3O94933 977 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 CYP3A4P08684 503 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 ZSCAN20P17040 1043 aaPredicted RBP11.67□□□□□ -0.54
TPM1-210ENST00000558264 GMPSP49915 693 aaPredicted RBP11.67□□□□□ -0.54
TPM1-210ENST00000558264 GRIPAP1Q4V328 841 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 ZC2HC1CQ53FD0 456 aaPredicted RBP11.67□□□□□ -0.54
TPM1-210ENST00000558264 CACNA2D4Q7Z3S7 1137 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 ZBED3Q96IU2 234 aaPredicted RBP11.67□□□□□ -0.54
TPM1-210ENST00000558264 CCDC42Q96M95 316 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 NAPGQ99747 312 aaPredicted RBP11.67□□□□□ -0.54
TPM1-210ENST00000558264 LSM14BQ9BX40 385 aaKnown RBP11.67□□□□□ -0.54
TPM1-210ENST00000558264 UNC45AQ9H3U1 944 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 RNF216Q9NWF9 866 aaPredicted RBP11.67□□□□□ -0.54
TPM1-210ENST00000558264 FEM1BQ9UK73 627 aa11.67□□□□□ -0.54
TPM1-210ENST00000558264 TBC1D12O60347 775 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 TBCAO75347 108 aaKnown RBP11.66□□□□□ -0.54
TPM1-210ENST00000558264 PSMD10O75832 226 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 H2AFXP16104 143 aaPredicted RBP11.66□□□□□ -0.54
TPM1-210ENST00000558264 NMT1P30419 496 aaKnown RBP11.66□□□□□ -0.54
TPM1-210ENST00000558264 CYLC1P35663 651 aaPredicted RBP11.66□□□□□ -0.54
TPM1-210ENST00000558264 EIF4A3P38919 411 aaKnown RBP11.66□□□□□ -0.54
TPM1-210ENST00000558264 MTMR2Q13614 643 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 CEP55Q53EZ4 464 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 MUM1L1Q5H9M0 696 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 NBPF12Q5TAG4 269 aaPredicted RBP11.66□□□□□ -0.54
TPM1-210ENST00000558264 RETREG2Q8NC44 543 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 NEK11Q8NG66 645 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 DRC1Q96MC2 740 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 TEPSINQ96N21 525 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 DEF6Q9H4E7 631 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.66□□□□□ -0.54
TPM1-210ENST00000558264 FAM170AA1A519 330 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 FRMD3A2A2Y4 597 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 IPO7O95373 1038 aaKnown RBP11.66□□□□□ -0.54
TPM1-210ENST00000558264 ATP1A1P05023 1023 aaKnown RBP11.66□□□□□ -0.54
TPM1-210ENST00000558264 PRELPP51888 382 aa11.66□□□□□ -0.54
TPM1-210ENST00000558264 CHMP4BP1P59074 171 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms