RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 SENP7Q9BQF6 1050 aa13.74□□□□□ -0.21
ACTN1-221ENST00000556571 MYH6P13533 1939 aa13.74□□□□□ -0.21
ACTN1-221ENST00000556571 FRMPD4Q14CM0 1322 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 GRM6O15303 877 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 CHRNA1P02708 482 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 HYAL1Q12794 435 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 TRDNQ13061 729 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 SEMA3FQ13275 785 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 GRM4Q14833 912 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 SLC35G1Q2M3R5 365 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 UTP14CQ5TAP6 766 aaKnown RBP13.73□□□□□ -0.21
ACTN1-221ENST00000556571 HFE2Q6ZVN8 426 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 CYB5R4Q7L1T6 521 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 CHD1LQ86WJ1 897 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 SMC5Q8IY18 1101 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 CLP1Q92989 425 aaKnown RBP13.73□□□□□ -0.21
ACTN1-221ENST00000556571 EHMT1Q9H9B1 1298 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 RTEL1Q9NZ71 1219 aa13.73□□□□□ -0.21
ACTN1-221ENST00000556571 ADGRA3Q8IWK6 1321 aa13.72□□□□□ -0.21
ACTN1-221ENST00000556571 ENPP3O14638 875 aa13.72□□□□□ -0.21
ACTN1-221ENST00000556571 MBTPS2O43462 519 aa13.72□□□□□ -0.21
ACTN1-221ENST00000556571 GHRP10912 638 aa13.72□□□□□ -0.21
ACTN1-221ENST00000556571 DLX2Q07687 328 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-221ENST00000556571 SMAD4Q13485 552 aaKnown RBP13.72□□□□□ -0.21
ACTN1-221ENST00000556571 AAMPQ13685 434 aa13.72□□□□□ -0.21
ACTN1-221ENST00000556571 BTG3Q14201 252 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-221ENST00000556571 CLUL1Q15846 466 aa13.72□□□□□ -0.21
ACTN1-221ENST00000556571 HERC4Q5GLZ8 1057 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-221ENST00000556571 B4GALNT3Q6L9W6 998 aa13.72□□□□□ -0.21
ACTN1-221ENST00000556571 XRRA1Q6P2D8 792 aa13.72□□□□□ -0.21
ACTN1-221ENST00000556571 RSPH3Q86UC2 560 aa13.72□□□□□ -0.21
ACTN1-221ENST00000556571 GIMAP8Q8ND71 665 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-221ENST00000556571 PLVAPQ9BX97 442 aa13.72□□□□□ -0.21
ACTN1-221ENST00000556571 RWDD1Q9H446 243 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-221ENST00000556571 RC3H2Q9HBD1 1191 aaKnown RBP13.72□□□□□ -0.21
ACTN1-221ENST00000556571 ZNF318Q5VUA4 2279 aa13.71□□□□□ -0.21
ACTN1-221ENST00000556571 ERICH2A1L162 156 aa13.71□□□□□ -0.21
ACTN1-221ENST00000556571 IFIT3O14879 490 aaKnown RBP13.71□□□□□ -0.21
ACTN1-221ENST00000556571 CYTH3O43739 400 aa13.71□□□□□ -0.21
ACTN1-221ENST00000556571 SP4Q02446 784 aa13.71□□□□□ -0.21
ACTN1-221ENST00000556571 LPIN1Q14693 890 aa13.71□□□□□ -0.21
ACTN1-221ENST00000556571 NLRX1Q86UT6 975 aa13.71□□□□□ -0.21
ACTN1-221ENST00000556571 PPP2R3CQ969Q6 453 aa13.71□□□□□ -0.21
ACTN1-221ENST00000556571 ZNF689Q96CS4 500 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-221ENST00000556571 IGFLR1Q9H665 355 aa13.71□□□□□ -0.21
ACTN1-221ENST00000556571 MUTYHQ9UIF7 546 aa13.71□□□□□ -0.21
ACTN1-221ENST00000556571 CD207Q9UJ71 328 aa13.71□□□□□ -0.21
ACTN1-221ENST00000556571 LAMA4Q16363 1823 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 STXBP3O00186 592 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 DGKIO75912 1065 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 MMP1P03956 469 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 NUCB1Q02818 461 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 MGAT3Q09327 533 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 TROAPQ12815 778 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 PPFIA1Q13136 1202 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 ADAM15Q13444 863 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 NAALADL2Q58DX5 795 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 PCNX4Q63HM2 1172 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 RUFY4Q6ZNE9 571 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 RNF135Q8IUD6 432 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 CUL5Q93034 780 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 P2RX5Q93086 422 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 ALG13Q9NP73 1137 aaKnown RBP13.7□□□□□ -0.22
ACTN1-221ENST00000556571 PLAGL2Q9UPG8 496 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 TELO2Q9Y4R8 837 aa13.7□□□□□ -0.22
ACTN1-221ENST00000556571 SUPT16HQ9Y5B9 1047 aaKnown RBP13.7□□□□□ -0.22
ACTN1-221ENST00000556571 BAZ2BQ9UIF8 2168 aaKnown RBP13.7□□□□□ -0.22
ACTN1-221ENST00000556571 MBLAC1A4D2B0 266 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-221ENST00000556571 TBX10O75333 385 aa13.69□□□□□ -0.22
ACTN1-221ENST00000556571 RPLP2P05387 115 aaKnown RBP13.69□□□□□ -0.22
ACTN1-221ENST00000556571 GTF2F1P35269 517 aaKnown RBP eCLIP13.69□□□□□ -0.22
ACTN1-221ENST00000556571 TCF7P36402 384 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-221ENST00000556571 WTAPQ15007 396 aa13.69□□□□□ -0.22
ACTN1-221ENST00000556571 SART3Q15020 963 aaKnown RBP13.69□□□□□ -0.22
ACTN1-221ENST00000556571 FBXO47Q5MNV8 452 aa13.69□□□□□ -0.22
ACTN1-221ENST00000556571 TSHZ1Q6ZSZ6 1077 aa13.69□□□□□ -0.22
ACTN1-221ENST00000556571 SEPT1Q8WYJ6 367 aa13.69□□□□□ -0.22
ACTN1-221ENST00000556571 EDAQ92838 391 aa13.69□□□□□ -0.22
ACTN1-221ENST00000556571 CDHR1Q96JP9 859 aa13.69□□□□□ -0.22
ACTN1-221ENST00000556571 ERAP1Q9NZ08 941 aa13.69□□□□□ -0.22
ACTN1-221ENST00000556571 TUBE1Q9UJT0 475 aa13.69□□□□□ -0.22
ACTN1-221ENST00000556571 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-221ENST00000556571 TRIOO75962 3097 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 TECTAO75443 2155 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 LINC01565O15544 149 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 EYA4O95677 639 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 NDUFV1P49821 464 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 CAMK1Q14012 370 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 GRIK4Q16099 956 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 PKN1Q16512 942 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 BMP8AQ7Z5Y6 402 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 CATIPQ7Z7H3 387 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 CMTR2Q8IYT2 770 aaKnown RBP13.68□□□□□ -0.22
ACTN1-221ENST00000556571 DNAJB3Q8WWF6 145 aa13.68□□□□□ -0.22
ACTN1-221ENST00000556571 PIBF1Q8WXW3 757 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms