RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 DICER1Q9UPY3 1922 aaKnown RBP5.38□□□□□ -1.55
VTI1B-203ENST00000554636 C9IYK1 514 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 H0YIN7 160 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 APAF1O14727 1248 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 ANXA1P04083 346 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 TP53P04637 393 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-203ENST00000554636 SRGNP10124 158 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 EIF2S2P20042 333 aaKnown RBP5.38□□□□□ -1.55
VTI1B-203ENST00000554636 PDE6BP35913 854 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 PCBP3P57721 371 aaKnown RBP5.38□□□□□ -1.55
VTI1B-203ENST00000554636 C1QTNF8P60827 252 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 ST5P78524 1137 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 HDLBPQ00341 1268 aaKnown RBP5.38□□□□□ -1.55
VTI1B-203ENST00000554636 MESP2Q0VG99 397 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 DUSP4Q13115 394 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 STYK1Q6J9G0 422 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 KIF6Q6ZMV9 814 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 SYDE1Q6ZW31 735 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-203ENST00000554636 NBPF5PQ86XG9 351 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-203ENST00000554636 NT5DC4Q86YG4 428 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 ZNF654Q8IZM8 581 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 OXR1Q8N573 874 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 NGEFQ8N5V2 710 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 TTLL6Q8N841 843 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 DCP1AQ9NPI6 582 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-203ENST00000554636 CHST7Q9NS84 486 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 GINM1Q9NU53 330 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 IFT57Q9NWB7 429 aa5.38□□□□□ -1.55
VTI1B-203ENST00000554636 KLRG2A4D1S0 409 aaPredicted RBP5.37□□□□□ -1.55
VTI1B-203ENST00000554636 FITM1A5D6W6 292 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 SIGLEC6O43699 453 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 NTSR2O95665 410 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 HOXB7P09629 217 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 GPTP24298 496 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 CCNFP41002 786 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 ZYXQ15942 572 aaKnown RBP5.37□□□□□ -1.55
VTI1B-203ENST00000554636 BBS9Q3SYG4 887 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 SUSD4Q5VX71 490 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 CRTC3Q6UUV7 619 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 METTL16Q86W50 562 aaKnown RBP5.37□□□□□ -1.55
VTI1B-203ENST00000554636 PPFIBP1Q86W92 1011 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 LSRQ86X29 649 aaPredicted RBP5.37□□□□□ -1.55
VTI1B-203ENST00000554636 ZNF34Q8IZ26 560 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 ZNF655Q8N720 491 aaPredicted RBP5.37□□□□□ -1.55
VTI1B-203ENST00000554636 DAGLBQ8NCG7 672 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 ENOX1Q8TC92 643 aaKnown RBP5.37□□□□□ -1.55
VTI1B-203ENST00000554636 ZNF526Q8TF50 670 aaPredicted RBP5.37□□□□□ -1.55
VTI1B-203ENST00000554636 ZNF622Q969S3 477 aaKnown RBP eCLIP5.37□□□□□ -1.55
VTI1B-203ENST00000554636 FAM84AQ96KN4 292 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 DSCC1Q9BVC3 393 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 EPB41L4BQ9H329 900 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 SP110Q9HB58 689 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 DDX21Q9NR30 783 aaKnown RBP eCLIP5.37□□□□□ -1.55
VTI1B-203ENST00000554636 RNF181Q9P0P0 153 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 KIAA1522Q9P206 1035 aaPredicted RBP5.37□□□□□ -1.55
VTI1B-203ENST00000554636 EFR3BQ9Y2G0 817 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 LAMB2P55268 1798 aa5.37□□□□□ -1.55
VTI1B-203ENST00000554636 NPHP1O15259 732 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 ANP32CO43423 234 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 PSPNO60542 156 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 IMPDH2P12268 514 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 NPR1P16066 1061 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 VAMP1P23763 118 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 JAG1P78504 1218 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 AUHQ13825 339 aaKnown RBP5.36□□□□□ -1.55
VTI1B-203ENST00000554636 CRY2Q49AN0 593 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 PARP10Q53GL7 1025 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 DCAF15Q66K64 600 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 RNF111Q6ZNA4 994 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 CEP128Q6ZU80 1094 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 COPS6Q7L5N1 327 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 MASTLQ96GX5 879 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 CDADC1Q9BWV3 514 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 NYXQ9GZU5 481 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 NMRK2Q9NPI5 230 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 CHPF2Q9P2E5 772 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 SUCOQ9UBS9 1254 aaKnown RBP5.36□□□□□ -1.55
VTI1B-203ENST00000554636 LAS1LQ9Y4W2 734 aaKnown RBP5.36□□□□□ -1.55
VTI1B-203ENST00000554636 LTBP3Q9NS15 1303 aa5.36□□□□□ -1.55
VTI1B-203ENST00000554636 DDX60Q8IY21 1712 aaKnown RBP5.36□□□□□ -1.55
VTI1B-203ENST00000554636 WDR90Q96KV7 1748 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 RNF123Q5XPI4 1314 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 TMEM82A0PJX8 343 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 CTSKP43235 329 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 GNAI1P63096 354 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 CALD1Q05682 793 aaKnown RBP5.35□□□□□ -1.55
VTI1B-203ENST00000554636 HSP90AB3PQ58FF7 597 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 UNC5AQ6ZN44 842 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 ZNF605Q86T29 641 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 NLRP10Q86W26 655 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 SPPL2CQ8IUH8 684 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 LILRA2Q8N149 483 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 ANKS4BQ8N8V4 417 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 FBXO15Q8NCQ5 510 aaPredicted RBP5.35□□□□□ -1.55
VTI1B-203ENST00000554636 RGS22Q8NE09 1264 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 GPRASP2Q96D09 838 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 MAP6Q96JE9 813 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 DHRS1Q96LJ7 313 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 CRBNQ96SW2 442 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 TM9SF2Q99805 663 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms