RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 SAMD11Q96NU1 681 aa12.29□□□□□ -0.44
PNN-203ENST00000554117 TGS1Q96RS0 853 aaKnown RBP12.29□□□□□ -0.44
PNN-203ENST00000554117 COG5Q9UP83 839 aa12.29□□□□□ -0.44
PNN-203ENST00000554117 PRRC2BQ5JSZ5 2229 aaKnown RBP12.29□□□□□ -0.44
PNN-203ENST00000554117 TTC3P53804 2025 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 KLF18A0A0U1RQI7 1052 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 TNFRSF10AO00220 468 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 TREHO43280 583 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 NBNO60934 754 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 CTSHP09668 335 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 PSMA5P28066 241 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 METAP2P50579 478 aaKnown RBP eCLIP12.28□□□□□ -0.44
PNN-203ENST00000554117 RCAN1P53805 252 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 ZNF200P98182 395 aaPredicted RBP12.28□□□□□ -0.44
PNN-203ENST00000554117 TAP1Q03518 808 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 PPFIA1Q13136 1202 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 AP3B2Q13367 1082 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 UBE2SQ16763 222 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 PTPROQ16827 1216 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 FAM117BQ6P1L5 589 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 BLOC1S2Q6QNY1 142 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 USP38Q8NB14 1042 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 DHX38Q92620 1227 aaKnown RBP12.28□□□□□ -0.44
PNN-203ENST00000554117 GPKOWQ92917 476 aaPredicted RBP eCLIP12.28□□□□□ -0.44
PNN-203ENST00000554117 ASB2Q96Q27 587 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 YME1L1Q96TA2 773 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 JPH1Q9HDC5 661 aaPredicted RBP12.28□□□□□ -0.44
PNN-203ENST00000554117 SETD4Q9NVD3 440 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 RNF216Q9NWF9 866 aaPredicted RBP12.28□□□□□ -0.44
PNN-203ENST00000554117 LMCD1Q9NZU5 365 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 PKD2L1Q9P0L9 805 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 SLC9A2Q9UBY0 812 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 CDH23Q9H251 3354 aa12.28□□□□□ -0.44
PNN-203ENST00000554117 PLXNA4Q9HCM2 1894 aa12.27□□□□□ -0.44
PNN-203ENST00000554117 TRANK1O15050 2925 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 hCG_1642624A0A1W2PR95 340 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 SMCO2A6NFE2 343 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 DEFB103AP81534 67 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 ADGRE1Q14246 886 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 SLC35G1Q2M3R5 365 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 PLEKHG4Q58EX7 1191 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 FAM160B1Q5W0V3 765 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 DBF4BQ8NFT6 615 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 BICD2Q8TD16 824 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 IFIH1Q9BYX4 1025 aaKnown RBP12.27□□□□□ -0.45
PNN-203ENST00000554117 C6orf50Q9HD87 102 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 RIC8AQ9NPQ8 531 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 JADE2Q9NQC1 790 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 TUBE1Q9UJT0 475 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 RWDD3Q9Y3V2 267 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 CNTNAP5Q8WYK1 1306 aa12.27□□□□□ -0.45
PNN-203ENST00000554117 UPP2O95045 317 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 POU3F3P20264 500 aaPredicted RBP12.26□□□□□ -0.45
PNN-203ENST00000554117 MARK3P27448 753 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 GNA11P29992 359 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 SLC26A2P50443 739 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 GRIK4Q16099 956 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 TRIM71Q2Q1W2 868 aaKnown RBP12.26□□□□□ -0.45
PNN-203ENST00000554117 TSGA10IPQ3SY00 556 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 ODR4Q5SWX8 454 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 IER5Q5VY09 327 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 FBXO22Q8NEZ5 403 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 CCDC148Q8NFR7 591 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 LMBR1Q8WVP7 490 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 HLA-CQ95604 372 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 MXRA8Q9BRK3 442 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 ANO3Q9BYT9 981 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 MTUS1Q9ULD2 1270 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 UBIAD1Q9Y5Z9 338 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 MTCH2Q9Y6C9 303 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 COL4A6Q14031 1691 aa12.26□□□□□ -0.45
PNN-203ENST00000554117 KCNA2P16389 499 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 IGBP1P78318 339 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 SETQ01105 290 aaPredicted RBP12.25□□□□□ -0.45
PNN-203ENST00000554117 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 WWC2Q6AWC2 1192 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 TRIM50Q86XT4 487 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 ADAMTS19Q8TE59 1207 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 VWCEQ96DN2 955 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 JAKMIP1Q96N16 626 aaKnown RBP12.25□□□□□ -0.45
PNN-203ENST00000554117 CTAGE1Q96RT6 745 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 UHRF1Q96T88 793 aaPredicted RBP12.25□□□□□ -0.45
PNN-203ENST00000554117 BARHL2Q9NY43 387 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 V9GY48 417 aaPredicted RBP12.25□□□□□ -0.45
PNN-203ENST00000554117 NFASCO94856 1347 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 PRUNE2Q8WUY3 3088 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 ARID2Q68CP9 1835 aa12.25□□□□□ -0.45
PNN-203ENST00000554117 RFXAPO00287 272 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 BACH1O14867 736 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 HOXC8P31273 242 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 STAT5BP51692 787 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 ERVK-21P61565 698 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 EXOSC10Q01780 885 aaKnown RBP12.24□□□□□ -0.45
PNN-203ENST00000554117 GRB10Q13322 594 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 CEP55Q53EZ4 464 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 CPLX2Q6PUV4 134 aaKnown RBP12.24□□□□□ -0.45
PNN-203ENST00000554117 FAM43BQ6ZT52 329 aaPredicted RBP12.24□□□□□ -0.45
PNN-203ENST00000554117 Q6ZUG5 572 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms