RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 ATP2A2P16615 1042 aaKnown RBP23.54■■□□□ 1.36
HIF1A-206ENST00000553999 IFNAR1P17181 557 aa23.54■■□□□ 1.36
HIF1A-206ENST00000553999 SSRP1Q08945 709 aaKnown RBP23.54■■□□□ 1.36
HIF1A-206ENST00000553999 GRIN2CQ14957 1233 aa23.54■■□□□ 1.36
HIF1A-206ENST00000553999 TCTN1Q2MV58 587 aa23.54■■□□□ 1.36
HIF1A-206ENST00000553999 TRIM71Q2Q1W2 868 aaKnown RBP23.54■■□□□ 1.36
HIF1A-206ENST00000553999 CEP55Q53EZ4 464 aa23.54■■□□□ 1.36
HIF1A-206ENST00000553999 TMCO2Q7Z6W1 182 aaPredicted RBP23.54■■□□□ 1.36
HIF1A-206ENST00000553999 ZBTB10Q96DT7 871 aa23.54■■□□□ 1.36
HIF1A-206ENST00000553999 TM6SF1Q9BZW5 370 aa23.54■■□□□ 1.36
HIF1A-206ENST00000553999 NBNO60934 754 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 RFC2P35250 354 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 IGBP1P78318 339 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 ITGB3BPQ13352 177 aaPredicted RBP23.53■■□□□ 1.36
HIF1A-206ENST00000553999 GPNMBQ14956 572 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 PLA2G4DQ86XP0 818 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 TRIM22Q8IYM9 498 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 CCDC12Q8WUD4 166 aaPredicted RBP23.53■■□□□ 1.36
HIF1A-206ENST00000553999 SEPT1Q8WYJ6 367 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 SDF4Q9BRK5 362 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 ZMYND12Q9H0C1 365 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 ZNF576Q9H609 170 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 AGO4Q9HCK5 861 aaKnown RBP23.53■■□□□ 1.36
HIF1A-206ENST00000553999 SLC9A2Q9UBY0 812 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 MSRAQ9UJ68 235 aa23.53■■□□□ 1.36
HIF1A-206ENST00000553999 FAM86B1E9PN63 330 aa23.52■■□□□ 1.36
HIF1A-206ENST00000553999 SEC24BO95487 1268 aa23.52■■□□□ 1.36
HIF1A-206ENST00000553999 PFKMP08237 780 aa23.52■■□□□ 1.36
HIF1A-206ENST00000553999 FAM86B2P0C5J1 330 aa23.52■■□□□ 1.36
HIF1A-206ENST00000553999 EVCP57679 992 aa23.52■■□□□ 1.36
HIF1A-206ENST00000553999 NLRP5P59047 1200 aa23.52■■□□□ 1.36
HIF1A-206ENST00000553999 SERINC5Q86VE9 423 aa23.52■■□□□ 1.36
HIF1A-206ENST00000553999 CCDC148Q8NFR7 591 aa23.52■■□□□ 1.36
HIF1A-206ENST00000553999 LMBR1Q8WVP7 490 aa23.52■■□□□ 1.36
HIF1A-206ENST00000553999 GLT8D2Q9H1C3 349 aa23.52■■□□□ 1.36
HIF1A-206ENST00000553999 GBF1Q92538 1859 aa23.51■■□□□ 1.35
HIF1A-206ENST00000553999 LAMA2P24043 3122 aaKnown RBP23.51■■□□□ 1.35
HIF1A-206ENST00000553999 ESYT2A0FGR8 921 aa23.51■■□□□ 1.35
HIF1A-206ENST00000553999 PPFIA1Q13136 1202 aa23.51■■□□□ 1.35
HIF1A-206ENST00000553999 MBTPS1Q14703 1052 aa23.51■■□□□ 1.35
HIF1A-206ENST00000553999 TRAF7Q6Q0C0 670 aa23.51■■□□□ 1.35
HIF1A-206ENST00000553999 TPCN1Q9ULQ1 816 aa23.51■■□□□ 1.35
HIF1A-206ENST00000553999 FOSL2P15408 326 aa23.5■■□□□ 1.35
HIF1A-206ENST00000553999 AK2P54819 239 aa23.5■■□□□ 1.35
HIF1A-206ENST00000553999 ACTR2P61160 394 aa23.5■■□□□ 1.35
HIF1A-206ENST00000553999 RAB30Q15771 203 aa23.5■■□□□ 1.35
HIF1A-206ENST00000553999 RUFY4Q6ZNE9 571 aa23.5■■□□□ 1.35
HIF1A-206ENST00000553999 PCYT2Q99447 389 aa23.5■■□□□ 1.35
HIF1A-206ENST00000553999 OSBPL7Q9BZF2 842 aa23.5■■□□□ 1.35
HIF1A-206ENST00000553999 PRDM12Q9H4Q4 367 aa23.5■■□□□ 1.35
HIF1A-206ENST00000553999 TET1Q8NFU7 2136 aa23.5■■□□□ 1.35
HIF1A-206ENST00000553999 GNA11P29992 359 aa23.49■■□□□ 1.35
HIF1A-206ENST00000553999 KCNJ6P48051 423 aa23.49■■□□□ 1.35
HIF1A-206ENST00000553999 SCRN1Q12765 414 aa23.49■■□□□ 1.35
HIF1A-206ENST00000553999 GRIK4Q16099 956 aa23.49■■□□□ 1.35
HIF1A-206ENST00000553999 PRR16Q569H4 304 aa23.49■■□□□ 1.35
HIF1A-206ENST00000553999 FAM117BQ6P1L5 589 aa23.49■■□□□ 1.35
HIF1A-206ENST00000553999 TRMT1LQ7Z2T5 733 aaKnown RBP23.49■■□□□ 1.35
HIF1A-206ENST00000553999 SLC17A8Q8NDX2 589 aa23.49■■□□□ 1.35
HIF1A-206ENST00000553999 TRAPPC12Q8WVT3 735 aa23.49■■□□□ 1.35
HIF1A-206ENST00000553999 ZNF274Q96GC6 653 aaPredicted RBP23.49■■□□□ 1.35
HIF1A-206ENST00000553999 SLKQ9H2G2 1235 aaPredicted RBP23.49■■□□□ 1.35
HIF1A-206ENST00000553999 TRPC6Q9Y210 931 aa23.49■■□□□ 1.35
HIF1A-206ENST00000553999 RSPH10B2B2RC85 870 aa23.48■■□□□ 1.35
HIF1A-206ENST00000553999 MEIS1O00470 390 aa23.48■■□□□ 1.35
HIF1A-206ENST00000553999 RSPH10BP0C881 870 aa23.48■■□□□ 1.35
HIF1A-206ENST00000553999 FOSBP53539 338 aa23.48■■□□□ 1.35
HIF1A-206ENST00000553999 DEFB103AP81534 67 aa23.48■■□□□ 1.35
HIF1A-206ENST00000553999 RBL2Q08999 1139 aa23.48■■□□□ 1.35
HIF1A-206ENST00000553999 PPP2R2DQ66LE6 453 aa23.48■■□□□ 1.35
HIF1A-206ENST00000553999 CPLX2Q6PUV4 134 aaKnown RBP23.48■■□□□ 1.35
HIF1A-206ENST00000553999 NECAB1Q8N987 351 aa23.48■■□□□ 1.35
HIF1A-206ENST00000553999 AZI2Q9H6S1 392 aa23.48■■□□□ 1.35
HIF1A-206ENST00000553999 CERS4Q9HA82 394 aa23.48■■□□□ 1.35
HIF1A-206ENST00000553999 ERAP1Q9NZ08 941 aa23.48■■□□□ 1.35
HIF1A-206ENST00000553999 BACH1O14867 736 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 MAFGO15525 162 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 LARGE1O95461 756 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 CCNE2O96020 404 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 CA3P07451 260 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 GNAT1P11488 350 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 HOXC8P31273 242 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 MAFAQ8NHW3 353 aaPredicted RBP23.47■■□□□ 1.35
HIF1A-206ENST00000553999 ZNF577Q9BSK1 485 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 FAM49AQ9H0Q0 323 aaPredicted RBP23.47■■□□□ 1.35
HIF1A-206ENST00000553999 SMARCAD1Q9H4L7 1026 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 SLC28A3Q9HAS3 691 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 GJB4Q9NTQ9 266 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 KCNJ14Q9UNX9 436 aa23.47■■□□□ 1.35
HIF1A-206ENST00000553999 IGLV3-22A0A075B6J6 115 aa23.46■■□□□ 1.35
HIF1A-206ENST00000553999 TMEM265A0A087WTH1 108 aa23.46■■□□□ 1.35
HIF1A-206ENST00000553999 NFASCO94856 1347 aa23.46■■□□□ 1.35
HIF1A-206ENST00000553999 DEXIO95424 95 aa23.46■■□□□ 1.35
HIF1A-206ENST00000553999 WDR5P61964 334 aaKnown RBP23.46■■□□□ 1.35
HIF1A-206ENST00000553999 CNKSR3Q6P9H4 555 aa23.46■■□□□ 1.35
HIF1A-206ENST00000553999 BICD2Q8TD16 824 aa23.46■■□□□ 1.35
HIF1A-206ENST00000553999 PPM1EQ8WY54 764 aa23.46■■□□□ 1.35
HIF1A-206ENST00000553999 GJA10Q969M2 543 aa23.46■■□□□ 1.35
HIF1A-206ENST00000553999 SLC9A7Q96T83 725 aa23.46■■□□□ 1.35
HIF1A-206ENST00000553999 EMSYQ7Z589 1322 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms