RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 DDX47Q9H0S4 455 aaKnown RBP17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 SH2D4AQ9H788 454 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 HAUS2Q9NVX0 235 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 A0A1W2PQC6 194 aa17.08■□□□□ 0.33
RBFOX1-212ENST00000550418 RASSF10A6NK89 507 aa17.08■□□□□ 0.33
RBFOX1-212ENST00000550418 PRKAB2O43741 272 aa17.08■□□□□ 0.33
RBFOX1-212ENST00000550418 TBCKQ8TEA7 893 aa17.08■□□□□ 0.33
RBFOX1-212ENST00000550418 INO80Q9ULG1 1556 aaPredicted RBP17.08■□□□□ 0.33
RBFOX1-212ENST00000550418 FRMPD2Q68DX3 1309 aaPredicted RBP17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 QRICH2Q9H0J4 1663 aa17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 WDR91A4D1P6 747 aa17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 GYG2O15488 501 aa17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 GFPT1Q06210 699 aaPredicted RBP17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 AOC3Q16853 763 aa17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 SYT2Q8N9I0 419 aaPredicted RBP17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 SUGCTQ9HAC7 445 aa17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 DIP2CQ9Y2E4 1556 aa17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 MED14O60244 1454 aa17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 CEP72Q9P209 647 aa17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 DIS3Q9Y2L1 958 aaKnown RBP17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 TRPA1O75762 1119 aa17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 MFAP3P55082 362 aa17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 CYTH2Q99418 400 aa17.08■□□□□ 0.32
RBFOX1-212ENST00000550418 LMTK2Q8IWU2 1503 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 SGK1O00141 431 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 MX2P20592 715 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 SLC12A2P55011 1212 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 PTK2Q05397 1052 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 TRIP13Q15645 432 aaPredicted RBP17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 CARD10Q9BWT7 1032 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 AZI2Q9H6S1 392 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 ECT2Q9H8V3 914 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 FGFR1OP2Q9NVK5 253 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 DNAJC17Q9NVM6 304 aaKnown RBP17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 EIF4E1BA6NMX2 242 aaKnown RBP17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 ODR4Q5SWX8 454 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 RAD9BQ6WBX8 426 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 CNBD1Q8NA66 436 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 IL17RAQ96F46 866 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 ARHGEF10LQ9HCE6 1279 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 GEMIN8Q9NWZ8 242 aaKnown RBP17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 FBXL5Q9UKA1 691 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 LSP1P33241 339 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 PMS2P54278 862 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 NOA1Q8NC60 698 aaKnown RBP17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 LRRC37BQ96QE4 947 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 CHP1Q99653 195 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 MAD1L1Q9Y6D9 718 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 RAD23BP54727 409 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 SLC8A3P57103 927 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 ASPHQ12797 758 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 RPS6KA2Q15349 733 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 ANKRD20A4Q4UJ75 823 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 ANKRD20A8PQ5CZ79 823 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 ANKRD20A2Q5SQ80 823 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 ANKRD20A1Q5TYW2 823 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 CAPN11Q9UMQ6 739 aa17.07■□□□□ 0.32
RBFOX1-212ENST00000550418 KIDINS220Q9ULH0 1771 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 BPIFB4P59827 614 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 GRAMD1BQ3KR37 738 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 TUBE1Q9UJT0 475 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 PNPLA6Q8IY17 1366 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 WDR19Q8NEZ3 1342 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 KIF28PB7ZC32 967 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 ECM2O94769 699 aaPredicted RBP17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 KCNQ4P56696 695 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 NT5C1BQ96P26 610 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 TMEM60Q9H2L4 133 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 DLATP10515 647 aaKnown RBP17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 RHOT2Q8IXI1 618 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 MB21D2Q8IYB1 491 aaPredicted RBP17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 PIP4K2CQ8TBX8 421 aa17.06■□□□□ 0.32
RBFOX1-212ENST00000550418 ZNF185O15231 689 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 CLIC2O15247 247 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 LCORLQ8N3X6 602 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 NME8Q8N427 588 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 TRIM11Q96F44 468 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 DYDC2Q96IM9 177 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 CYP27B1O15528 508 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 MYCLP12524 364 aaPredicted RBP17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 TRIM55Q9BYV6 548 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 MLXIPLQ9NP71 852 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 KCNG1Q9UIX4 513 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 A0A0G2JND7 137 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 RASA4BC9J798 803 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 RASA4O43374 803 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 STAM2O75886 525 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 FXR1P51114 621 aaKnown RBP eCLIP17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 PHEXP78562 749 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 PDE1BQ01064 536 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 FMR1Q06787 632 aaKnown RBP eCLIP17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 REXO1L1PQ8IX06 675 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 SRRM1Q8IYB3 904 aaKnown RBP17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms