RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 ROR2Q01974 943 aaKnown RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 MEA1Q16626 185 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 SHC4Q6S5L8 630 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.78□□□□□ -1.48
USP28-213ENST00000544967 WHAMMQ8TF30 809 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 CUL5Q93034 780 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 FAM212AQ96EL1 285 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 STRBPQ96SI9 672 aaKnown RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 MAP3K14Q99558 947 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.78□□□□□ -1.481e-6■■■□□ 14.8
USP28-213ENST00000544967 ADGRA2Q96PE1 1338 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 GOLGA6L10A0A0M3HER8 536 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 A6NHS1 94 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 E7ENQ6 273 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 MPHOSPH10O00566 681 aaKnown RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 KRT86O43790 486 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 RTN3O95197 1032 aaPredicted RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 VIMP08670 466 aaKnown RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 TCP1P17987 556 aaKnown RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 RAB27AP51159 221 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 RBL2Q08999 1139 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 ITIH4Q14624 930 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 POSTNQ15063 836 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 DLGAP5Q15398 846 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 TTMPQ5BVD1 217 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 AGBL2Q5U5Z8 902 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 MIS18BP1Q6P0N0 1132 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 CACNA2D4Q7Z3S7 1137 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 OGFOD1Q8N543 542 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 PBXIP1Q96AQ6 731 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 CDCA5Q96FF9 252 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 SPAG5Q96R06 1193 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 CCT8L2Q96SF2 557 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 DNAJC7Q99615 494 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 DESI2Q9BSY9 194 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 LZTFL1Q9NQ48 299 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 HERC5Q9UII4 1024 aaKnown RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 C15orf41Q9Y2V0 281 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 PCDHA5Q9Y5H7 936 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 ASTN2O75129 1339 aaPredicted RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 POTEIP0CG38 1075 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 POTEJP0CG39 1038 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 CASP14P31944 242 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 GBP2P32456 591 aaPredicted RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 GCKP35557 465 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 SH3BGRP55822 239 aaPredicted RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 AKAP17AQ02040 695 aaKnown RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 STK3Q13188 491 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 CUL4BQ13620 913 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 SAMD7Q7Z3H4 446 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 VPS37DQ86XT2 251 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 GPIHBP1Q8IV16 184 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 RBM12BQ8IXT5 1001 aaKnown RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 DNAJC5GQ8N7S2 189 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 ACRBPQ8NEB7 543 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 RASSF8Q8NHQ8 419 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 LMBR1Q8WVP7 490 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 BICD1Q96G01 975 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 CCDC114Q96M63 670 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 FTOQ9C0B1 505 aaKnown RBP eCLIP5.78□□□□□ -1.48
USP28-213ENST00000544967 DDX4Q9NQI0 724 aaKnown RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 GDF3Q9NR23 364 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 DMGDHQ9UI17 866 aaKnown RBP5.78□□□□□ -1.48
USP28-213ENST00000544967 TRPC6Q9Y210 931 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.78□□□□□ -1.48
USP28-213ENST00000544967 SLC45A1Q9Y2W3 748 aa5.78□□□□□ -1.48
USP28-213ENST00000544967 ZNF532Q9HCE3 1301 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 ANKRD65E5RJM6 399 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 CES2O00748 559 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 NDUFA10O95299 355 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 GYPCP04921 128 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 RRM1P23921 792 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 HOXA7P31268 230 aaPredicted RBP5.77□□□□□ -1.49
USP28-213ENST00000544967 BTDP43251 543 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 MOGSQ13724 837 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 BLMHQ13867 455 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 LBRQ14739 615 aaKnown RBP5.77□□□□□ -1.49
USP28-213ENST00000544967 IFI16Q16666 785 aaKnown RBP5.77□□□□□ -1.49
USP28-213ENST00000544967 SGSM1Q2NKQ1 1148 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 CWF19L1Q69YN2 538 aaKnown RBP5.77□□□□□ -1.49
USP28-213ENST00000544967 JAZF1Q86VZ6 243 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 SNRNP27Q8WVK2 155 aaKnown RBP5.77□□□□□ -1.49
USP28-213ENST00000544967 ATP6V1G3Q96LB4 118 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 ALS2CR12Q96Q35 445 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 DNAJC18Q9H819 358 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 SPC25Q9HBM1 224 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 GGA3Q9NZ52 723 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 KCNH3Q9ULD8 1083 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 KCNH4Q9UQ05 1017 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 PCDHAC2Q9Y5I4 1007 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 EPN1Q9Y6I3 576 aaPredicted RBP5.77□□□□□ -1.49
USP28-213ENST00000544967 GRID2IPA4D2P6 1211 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 NPTXRO95502 500 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 ATP6V1G2O95670 118 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 VDRP11473 427 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 IMPDH2P12268 514 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 NR1D1P20393 614 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 BMP6P22004 513 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 FLT3P36888 993 aa5.77□□□□□ -1.49
USP28-213ENST00000544967 C1QTNF8P60827 252 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms