RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 RIT2Q99578 217 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 KCNMB3Q9NPA1 279 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 KIF3AQ9Y496 699 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 EMSYQ7Z589 1322 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 TRIM43BA6NCK2 446 aa21.68■■□□□ 1.06
DDX55-211ENST00000544429 DCDC2CA8MYV0 355 aa21.68■■□□□ 1.06
DDX55-211ENST00000544429 H3BRB1 525 aa21.68■■□□□ 1.06
DDX55-211ENST00000544429 SLC37A4O43826 429 aa21.68■■□□□ 1.06
DDX55-211ENST00000544429 B4GALT4O60513 344 aa21.68■■□□□ 1.06
DDX55-211ENST00000544429 MFSD10Q14728 455 aa21.68■■□□□ 1.06
DDX55-211ENST00000544429 SAFBQ15424 915 aaKnown RBP eCLIP21.68■■□□□ 1.06
DDX55-211ENST00000544429 LETM2Q2VYF4 491 aa21.68■■□□□ 1.06
DDX55-211ENST00000544429 SH3RF1Q7Z6J0 888 aa21.68■■□□□ 1.06
DDX55-211ENST00000544429 TRIM43Q96BQ3 446 aaPredicted RBP21.68■■□□□ 1.06
DDX55-211ENST00000544429 CTAGE1Q96RT6 745 aa21.68■■□□□ 1.06
DDX55-211ENST00000544429 TUT1Q9H6E5 874 aaKnown RBP21.68■■□□□ 1.06
DDX55-211ENST00000544429 WNT7AO00755 349 aa21.67■■□□□ 1.06
DDX55-211ENST00000544429 PSMD10O75832 226 aa21.67■■□□□ 1.06
DDX55-211ENST00000544429 SP4Q02446 784 aa21.67■■□□□ 1.06
DDX55-211ENST00000544429 KIAA0753Q2KHM9 967 aa21.67■■□□□ 1.06
DDX55-211ENST00000544429 ZNF746Q6NUN9 644 aaPredicted RBP21.67■■□□□ 1.06
DDX55-211ENST00000544429 ABHD15Q6UXT9 468 aa21.67■■□□□ 1.06
DDX55-211ENST00000544429 TRIM50Q86XT4 487 aa21.67■■□□□ 1.06
DDX55-211ENST00000544429 NAP1L4Q99733 375 aaKnown RBP21.67■■□□□ 1.06
DDX55-211ENST00000544429 DDX25Q9UHL0 483 aaKnown RBP21.67■■□□□ 1.06
DDX55-211ENST00000544429 GTF2IRD1Q9UHL9 959 aa21.67■■□□□ 1.06
DDX55-211ENST00000544429 SMC3Q9UQE7 1217 aa21.67■■□□□ 1.06
DDX55-211ENST00000544429 MYH9P35579 1960 aaKnown RBP21.67■■□□□ 1.06
DDX55-211ENST00000544429 KIF28PB7ZC32 967 aa21.66■■□□□ 1.06
DDX55-211ENST00000544429 NOSTRINQ8IVI9 506 aa21.66■■□□□ 1.06
DDX55-211ENST00000544429 PPP1R13LQ8WUF5 828 aa21.66■■□□□ 1.06
DDX55-211ENST00000544429 TRPV6Q9H1D0 765 aa21.66■■□□□ 1.06
DDX55-211ENST00000544429 PRO3102Q9H379 93 aa21.66■■□□□ 1.06
DDX55-211ENST00000544429 ZMYND8Q9ULU4 1186 aaPredicted RBP21.66■■□□□ 1.06
DDX55-211ENST00000544429 KAT6AQ92794 2004 aa21.65■■□□□ 1.06
DDX55-211ENST00000544429 TBX3O15119 743 aa21.65■■□□□ 1.06
DDX55-211ENST00000544429 SYN1P17600 705 aa21.65■■□□□ 1.06
DDX55-211ENST00000544429 ITGB8P26012 769 aa21.65■■□□□ 1.06
DDX55-211ENST00000544429 KRT76Q01546 638 aa21.65■■□□□ 1.06
DDX55-211ENST00000544429 HIC1Q14526 733 aa21.65■■□□□ 1.06
DDX55-211ENST00000544429 HAS1Q92839 578 aa21.65■■□□□ 1.06
DDX55-211ENST00000544429 UIMC1Q96RL1 719 aa21.65■■□□□ 1.06
DDX55-211ENST00000544429 TRMT13Q9NUP7 481 aaKnown RBP21.65■■□□□ 1.06
DDX55-211ENST00000544429 HDAC6Q9UBN7 1215 aa21.65■■□□□ 1.06
DDX55-211ENST00000544429 TLR3O15455 904 aaKnown RBP21.64■■□□□ 1.05
DDX55-211ENST00000544429 CCNT1O60563 726 aaKnown RBP21.64■■□□□ 1.05
DDX55-211ENST00000544429 GDF6Q6KF10 455 aaPredicted RBP21.64■■□□□ 1.05
DDX55-211ENST00000544429 PLPPR4Q7Z2D5 763 aa21.64■■□□□ 1.05
DDX55-211ENST00000544429 SMAP1Q8IYB5 467 aaPredicted RBP21.64■■□□□ 1.05
DDX55-211ENST00000544429 AFAP1L1Q8TED9 768 aa21.64■■□□□ 1.05
DDX55-211ENST00000544429 GJA10Q969M2 543 aa21.64■■□□□ 1.05
DDX55-211ENST00000544429 FAM20AQ96MK3 541 aa21.64■■□□□ 1.05
DDX55-211ENST00000544429 GDF15Q99988 308 aa21.64■■□□□ 1.05
DDX55-211ENST00000544429 RNPEPQ9H4A4 650 aa21.64■■□□□ 1.05
DDX55-211ENST00000544429 SMARCAD1Q9H4L7 1026 aa21.64■■□□□ 1.05
DDX55-211ENST00000544429 TMEM39AQ9NV64 488 aa21.64■■□□□ 1.05
DDX55-211ENST00000544429 ZNF215Q9UL58 517 aaPredicted RBP21.64■■□□□ 1.05
DDX55-211ENST00000544429 DDX39AO00148 427 aaKnown RBP21.63■■□□□ 1.05
DDX55-211ENST00000544429 SUPT20HL2P0C7V6 817 aa21.63■■□□□ 1.05
DDX55-211ENST00000544429 ADAM17P78536 824 aa21.63■■□□□ 1.05
DDX55-211ENST00000544429 UTP14CQ5TAP6 766 aaKnown RBP21.63■■□□□ 1.05
DDX55-211ENST00000544429 LRCH2Q5VUJ6 765 aa21.63■■□□□ 1.05
DDX55-211ENST00000544429 C7orf31Q8N865 590 aa21.63■■□□□ 1.05
DDX55-211ENST00000544429 ERAP1Q9NZ08 941 aa21.63■■□□□ 1.05
DDX55-211ENST00000544429 PCDH10Q9P2E7 1040 aa21.63■■□□□ 1.05
DDX55-211ENST00000544429 GAS7O60861 476 aa21.62■■□□□ 1.05
DDX55-211ENST00000544429 SMIM10L2AP0DMW4 78 aa21.62■■□□□ 1.05
DDX55-211ENST00000544429 SMIM10L2BP0DMW5 78 aa21.62■■□□□ 1.05
DDX55-211ENST00000544429 FAM47CQ5HY64 1035 aa21.62■■□□□ 1.05
DDX55-211ENST00000544429 POTEDQ86YR6 584 aa21.62■■□□□ 1.05
DDX55-211ENST00000544429 CCDC60Q8IWA6 550 aaPredicted RBP21.62■■□□□ 1.05
DDX55-211ENST00000544429 PRDM5Q9NQX1 630 aaPredicted RBP21.62■■□□□ 1.05
DDX55-211ENST00000544429 VAV3Q9UKW4 847 aa21.62■■□□□ 1.05
DDX55-211ENST00000544429 TANC1Q9C0D5 1861 aa21.62■■□□□ 1.05
DDX55-211ENST00000544429 TIMP1P01033 207 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 TRAPPC10P48553 1259 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 SLC26A2P50443 739 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 TOB1P50616 345 aaPredicted RBP21.61■■□□□ 1.05
DDX55-211ENST00000544429 RBL2Q08999 1139 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 PPP2R5CQ13362 524 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 ORC2Q13416 577 aaPredicted RBP21.61■■□□□ 1.05
DDX55-211ENST00000544429 LARP1BQ659C4 914 aaKnown RBP21.61■■□□□ 1.05
DDX55-211ENST00000544429 MIS18BP1Q6P0N0 1132 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 RDM1Q8NG50 284 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 MTMR9Q96QG7 549 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 NOC4LQ9BVI4 516 aaKnown RBP21.61■■□□□ 1.05
DDX55-211ENST00000544429 TEKT3Q9BXF9 490 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 UNC45AQ9H3U1 944 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 PRKAG2Q9UGJ0 569 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 PCDHA10Q9Y5I2 948 aa21.61■■□□□ 1.05
DDX55-211ENST00000544429 MAFBQ9Y5Q3 323 aaPredicted RBP21.61■■□□□ 1.05
DDX55-211ENST00000544429 WDR64B1ANS9 1081 aa21.6■■□□□ 1.05
DDX55-211ENST00000544429 SFNP31947 248 aa21.6■■□□□ 1.05
DDX55-211ENST00000544429 BMP8BP34820 402 aa21.6■■□□□ 1.05
DDX55-211ENST00000544429 MAGEA10P43363 369 aaPredicted RBP21.6■■□□□ 1.05
DDX55-211ENST00000544429 STAT5BP51692 787 aa21.6■■□□□ 1.05
DDX55-211ENST00000544429 SPIRE1Q08AE8 756 aa21.6■■□□□ 1.05
DDX55-211ENST00000544429 PTGISQ16647 500 aa21.6■■□□□ 1.05
DDX55-211ENST00000544429 GLG1Q92896 1179 aa21.6■■□□□ 1.05
DDX55-211ENST00000544429 IGSF9BQ9UPX0 1349 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms