RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 TBX21Q9UL17 535 aa20.26■□□□□ 0.83
TSFM-208ENST00000543727 SMC3Q9UQE7 1217 aa20.26■□□□□ 0.83
TSFM-208ENST00000543727 TBX3O15119 743 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 DHX15O43143 795 aaKnown RBP20.25■□□□□ 0.83
TSFM-208ENST00000543727 SORBS3O60504 671 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 DTNBO60941 627 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 LGR5O75473 907 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 ATG7O95352 703 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 ACTR2P61160 394 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 ORC2Q13416 577 aaPredicted RBP20.25■□□□□ 0.83
TSFM-208ENST00000543727 LETM2Q2VYF4 491 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 FAM47CQ5HY64 1035 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 SLC5A5Q92911 643 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 INTS4Q96HW7 963 aaKnown RBP20.25■□□□□ 0.83
TSFM-208ENST00000543727 FAM20AQ96MK3 541 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 LBHD1Q9BQE6 289 aaPredicted RBP20.25■□□□□ 0.83
TSFM-208ENST00000543727 AZI2Q9H6S1 392 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 PRDM5Q9NQX1 630 aaPredicted RBP20.25■□□□□ 0.83
TSFM-208ENST00000543727 GTF2IRD1Q9UHL9 959 aa20.25■□□□□ 0.83
TSFM-208ENST00000543727 ZMYND8Q9ULU4 1186 aaPredicted RBP20.25■□□□□ 0.83
TSFM-208ENST00000543727 TRIP12Q14669 1992 aaPredicted RBP20.25■□□□□ 0.83
TSFM-208ENST00000543727 GSTTP1A0A1W2PQM5 241 aa20.24■□□□□ 0.83
TSFM-208ENST00000543727 K7ELQ4 463 aaPredicted RBP20.24■□□□□ 0.83
TSFM-208ENST00000543727 MSH4O15457 936 aa20.24■□□□□ 0.83
TSFM-208ENST00000543727 B4GALT4O60513 344 aa20.24■□□□□ 0.83
TSFM-208ENST00000543727 GNAT1P11488 350 aa20.24■□□□□ 0.83
TSFM-208ENST00000543727 GJB2P29033 226 aa20.24■□□□□ 0.83
TSFM-208ENST00000543727 SFNP31947 248 aa20.24■□□□□ 0.83
TSFM-208ENST00000543727 SP4Q02446 784 aa20.24■□□□□ 0.83
TSFM-208ENST00000543727 RDM1Q8NG50 284 aa20.24■□□□□ 0.83
TSFM-208ENST00000543727 IGKV6D-21A0A0A0MT36 114 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 CCNT1O60563 726 aaKnown RBP20.23■□□□□ 0.83
TSFM-208ENST00000543727 GAS7O60861 476 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 TDP2O95551 362 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 RAG1P15918 1043 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 U2AF2P26368 475 aaKnown RBP eCLIP20.23■□□□□ 0.83
TSFM-208ENST00000543727 HOXC8P31273 242 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 BMP8BP34820 402 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 TRAPPC10P48553 1259 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 GNL2Q13823 731 aaKnown RBP20.23■□□□□ 0.83
TSFM-208ENST00000543727 LRCH2Q5VUJ6 765 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 MIS18BP1Q6P0N0 1132 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 PLPPR4Q7Z2D5 763 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 ETNPPLQ8TBG4 499 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 AFAP1L1Q8TED9 768 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 TEKT3Q9BXF9 490 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 KCNMB3Q9NPA1 279 aa20.23■□□□□ 0.83
TSFM-208ENST00000543727 A0A1W2PPC1 479 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 TRIM43BA6NCK2 446 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 WDR64B1ANS9 1081 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 TIMP1P01033 207 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 SYN1P17600 705 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 PDCP20941 246 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 JAK3P52333 1124 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 FOSBP53539 338 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 FAM160B1Q5W0V3 765 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 ABHD15Q6UXT9 468 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 NOSTRINQ8IVI9 506 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 SLFN12Q8IYM2 578 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 CCDC155Q8N6L0 562 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 GLG1Q92896 1179 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 TRIM43Q96BQ3 446 aaPredicted RBP20.22■□□□□ 0.83
TSFM-208ENST00000543727 HDAC6Q9UBN7 1215 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 NOD1Q9Y239 953 aa20.22■□□□□ 0.83
TSFM-208ENST00000543727 PITPNM1O00562 1244 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 PSMD10O75832 226 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 CCNE2O96020 404 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 PSAPP07602 524 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 GUCY1B3Q02153 619 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 PTGISQ16647 500 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 EARS2Q5JPH6 523 aaKnown RBP20.21■□□□□ 0.83
TSFM-208ENST00000543727 UTP14CQ5TAP6 766 aaKnown RBP20.21■□□□□ 0.83
TSFM-208ENST00000543727 SH3RF1Q7Z6J0 888 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 HSCBQ8IWL3 235 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 CAGE1Q8TC20 777 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 GDF15Q99988 308 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 TRPV6Q9H1D0 765 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 HIPK3Q9H422 1215 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 PCDHA10Q9Y5I2 948 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 NRCAMQ92823 1304 aa20.21■□□□□ 0.83
TSFM-208ENST00000543727 H3BQV1 296 aa20.2■□□□□ 0.82
TSFM-208ENST00000543727 DDX39AO00148 427 aaKnown RBP20.2■□□□□ 0.82
TSFM-208ENST00000543727 SLC37A4O43826 429 aa20.2■□□□□ 0.82
TSFM-208ENST00000543727 BAG4O95429 457 aaKnown RBP20.2■□□□□ 0.82
TSFM-208ENST00000543727 RPLP2P05387 115 aaKnown RBP20.2■□□□□ 0.82
TSFM-208ENST00000543727 SMIM10L2AP0DMW4 78 aa20.2■□□□□ 0.82
TSFM-208ENST00000543727 SMIM10L2BP0DMW5 78 aa20.2■□□□□ 0.82
TSFM-208ENST00000543727 MAGEA10P43363 369 aaPredicted RBP20.2■□□□□ 0.82
TSFM-208ENST00000543727 STAT5BP51692 787 aa20.2■□□□□ 0.82
TSFM-208ENST00000543727 CHMP4BP1P59074 171 aa20.2■□□□□ 0.82
TSFM-208ENST00000543727 RBL2Q08999 1139 aa20.2■□□□□ 0.82
TSFM-208ENST00000543727 GDF6Q6KF10 455 aaPredicted RBP20.2■□□□□ 0.82
TSFM-208ENST00000543727 TRIM50Q86XT4 487 aa20.2■□□□□ 0.82
TSFM-208ENST00000543727 TRMT13Q9NUP7 481 aaKnown RBP20.2■□□□□ 0.82
TSFM-208ENST00000543727 NOL7Q9UMY1 257 aaKnown RBP20.2■□□□□ 0.82
TSFM-208ENST00000543727 C17orf102A2RUQ5 167 aa20.19■□□□□ 0.82
TSFM-208ENST00000543727 PTK7Q13308 1070 aa20.19■□□□□ 0.82
TSFM-208ENST00000543727 BFSP2Q13515 415 aa20.19■□□□□ 0.82
TSFM-208ENST00000543727 MFSD5Q6N075 450 aa20.19■□□□□ 0.82
TSFM-208ENST00000543727 B3GNT9Q6UX72 402 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms