RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 GPKOWQ92917 476 aaPredicted RBP eCLIP18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 MTMR8Q96EF0 704 aa18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 USP26Q9BXU7 913 aa18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 JMJD4Q9H9V9 463 aa18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 TOMM22Q9NS69 142 aa18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 USP15Q9Y4E8 981 aaPredicted RBP18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 ITGB1P05556 798 aa18.93■□□□□ 0.62
CHMP4A-203ENST00000527154 GNAT1P11488 350 aa18.93■□□□□ 0.62
CHMP4A-203ENST00000527154 ASPRV1Q53RT3 343 aa18.93■□□□□ 0.62
CHMP4A-203ENST00000527154 TBC1D10CQ8IV04 446 aa18.93■□□□□ 0.62
CHMP4A-203ENST00000527154 PNMA1Q8ND90 353 aa18.93■□□□□ 0.62
CHMP4A-203ENST00000527154 ATP8B4Q8TF62 1192 aa18.93■□□□□ 0.62
CHMP4A-203ENST00000527154 PPP2R3CQ969Q6 453 aa18.93■□□□□ 0.62
CHMP4A-203ENST00000527154 IGFLR1Q9H665 355 aa18.93■□□□□ 0.62
CHMP4A-203ENST00000527154 BCAS3Q9H6U6 928 aa18.93■□□□□ 0.62
CHMP4A-203ENST00000527154 SETD4Q9NVD3 440 aa18.93■□□□□ 0.62
CHMP4A-203ENST00000527154 CFBP00751 764 aa18.92■□□□□ 0.62
CHMP4A-203ENST00000527154 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
CHMP4A-203ENST00000527154 LMBR1Q8WVP7 490 aa18.92■□□□□ 0.62
CHMP4A-203ENST00000527154 LINC01599Q8WXQ3 324 aa18.92■□□□□ 0.62
CHMP4A-203ENST00000527154 FRMPD4Q14CM0 1322 aa18.92■□□□□ 0.62
CHMP4A-203ENST00000527154 CCDC171Q6TFL3 1326 aa18.92■□□□□ 0.62
CHMP4A-203ENST00000527154 PPP1R11O60927 126 aaPredicted RBP18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 MX1P20591 662 aa18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 NBL1P41271 181 aa18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 BTG3Q14201 252 aaPredicted RBP18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 LPIN1Q14693 890 aa18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 METTL7BQ6UX53 244 aa18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 ASCL5Q7RTU5 278 aa18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 ERMP1Q7Z2K6 904 aa18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 CMTR2Q8IYT2 770 aaKnown RBP18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 MIER1Q8N108 512 aa18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 INPP4AQ96PE3 977 aaPredicted RBP18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 GPR20Q99678 358 aa18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 MLXIPQ9HAP2 919 aa18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 MRPL42Q9Y6G3 142 aaKnown RBP18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 GVINP1Q7Z2Y8 2422 aa18.91■□□□□ 0.62
CHMP4A-203ENST00000527154 SEMA3FQ13275 785 aa18.9■□□□□ 0.62
CHMP4A-203ENST00000527154 PTPN21Q16825 1174 aa18.9■□□□□ 0.62
CHMP4A-203ENST00000527154 MCMDC2Q4G0Z9 681 aa18.9■□□□□ 0.62
CHMP4A-203ENST00000527154 MFSD6Q6ZSS7 791 aa18.9■□□□□ 0.62
CHMP4A-203ENST00000527154 ESR2Q92731 530 aa18.9■□□□□ 0.62
CHMP4A-203ENST00000527154 ATOH1Q92858 354 aaPredicted RBP18.9■□□□□ 0.62
CHMP4A-203ENST00000527154 EVI5LQ96CN4 794 aa18.9■□□□□ 0.62
CHMP4A-203ENST00000527154 AMNQ9BXJ7 453 aa18.9■□□□□ 0.62
CHMP4A-203ENST00000527154 BARX2Q9UMQ3 279 aaPredicted RBP18.9■□□□□ 0.62
CHMP4A-203ENST00000527154 NEDD4P46934 1319 aa18.9■□□□□ 0.62
CHMP4A-203ENST00000527154 NRCAMQ92823 1304 aa18.9■□□□□ 0.62
CHMP4A-203ENST00000527154 A0A0D9SFI3 127 aa18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 PRR23AA6NEV1 266 aa18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 GALR2O43603 387 aaPredicted RBP18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 SORBS3O60504 671 aa18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 GHRP10912 638 aa18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 MYCLP12524 364 aaPredicted RBP18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 HAND2P61296 217 aa18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 KCNC3Q14003 757 aa18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 CCDC178Q5BJE1 867 aa18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 FBXO47Q5MNV8 452 aa18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 TAF2Q6P1X5 1199 aa18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 ZNF589Q86UQ0 364 aaPredicted RBP18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 FAM227BQ96M60 508 aa18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 RNF41Q9H4P4 317 aaPredicted RBP18.89■□□□□ 0.61
CHMP4A-203ENST00000527154 MBLAC1A4D2B0 266 aaPredicted RBP18.88■□□□□ 0.61
CHMP4A-203ENST00000527154 TMEM184AQ6ZMB5 413 aa18.88■□□□□ 0.61
CHMP4A-203ENST00000527154 KLHL23Q8NBE8 558 aa18.88■□□□□ 0.61
CHMP4A-203ENST00000527154 POF1BQ8WVV4 589 aa18.88■□□□□ 0.61
CHMP4A-203ENST00000527154 ZKSCAN3Q9BRR0 538 aa18.88■□□□□ 0.61
CHMP4A-203ENST00000527154 KIAA1671Q9BY89 1806 aa18.88■□□□□ 0.61
CHMP4A-203ENST00000527154 SPATA31C2B4DYI2 1134 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 H0Y858 1186 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 STAM2O75886 525 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 CCND2P30279 289 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 NRIP1P48552 1158 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 MRPS9P82933 396 aaKnown RBP18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 NEDD9Q14511 834 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 RUFY4Q6ZNE9 571 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 RTN4RL1Q86UN2 441 aaPredicted RBP18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 TRIM50Q86XT4 487 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 VN1R2Q8NFZ6 395 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 RIPOR3Q96MK2 946 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 S1PR5Q9H228 398 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 TLR9Q9NR96 1032 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 TELO2Q9Y4R8 837 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 SQORQ9Y6N5 450 aa18.87■□□□□ 0.61
CHMP4A-203ENST00000527154 MYH6P13533 1939 aa18.86■□□□□ 0.61
CHMP4A-203ENST00000527154 FSD2A1L4K1 749 aa18.86■□□□□ 0.61
CHMP4A-203ENST00000527154 ARHGAP4P98171 946 aa18.86■□□□□ 0.61
CHMP4A-203ENST00000527154 TSHZ1Q6ZSZ6 1077 aa18.86■□□□□ 0.61
CHMP4A-203ENST00000527154 ENAHQ8N8S7 591 aaPredicted RBP18.86■□□□□ 0.61
CHMP4A-203ENST00000527154 RPGRIP1Q96KN7 1286 aa18.86■□□□□ 0.61
CHMP4A-203ENST00000527154 CDCA3Q99618 268 aaPredicted RBP18.86■□□□□ 0.61
CHMP4A-203ENST00000527154 SENP7Q9BQF6 1050 aa18.86■□□□□ 0.61
CHMP4A-203ENST00000527154 AGO3Q9H9G7 860 aaKnown RBP18.86■□□□□ 0.61
CHMP4A-203ENST00000527154 ZNF215Q9UL58 517 aaPredicted RBP18.86■□□□□ 0.61
CHMP4A-203ENST00000527154 SUPT16HQ9Y5B9 1047 aaKnown RBP18.86■□□□□ 0.61
CHMP4A-203ENST00000527154 NOP56O00567 594 aaKnown RBP18.85■□□□□ 0.61
CHMP4A-203ENST00000527154 ZBTB5O15062 677 aa18.85■□□□□ 0.61
CHMP4A-203ENST00000527154 PDGFBP01127 241 aaPredicted RBP18.85■□□□□ 0.61
CHMP4A-203ENST00000527154 PARP1P09874 1014 aaKnown RBP18.85■□□□□ 0.61
CHMP4A-203ENST00000527154 HOXA13P31271 388 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms