RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 PDLIM7Q9NR12 457 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 GJB4Q9NTQ9 266 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 TRPC6Q9Y210 931 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 MCM3APO60318 1980 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 CYP3A7-CYP3A51PA0A087WV96 503 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 C17orf102A2RUQ5 167 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 BTBD18B2RXH4 712 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 M0R2N6 131 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 KIAA0355O15063 1070 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 TBX3O15119 743 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 CHMP2AO43633 222 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 B4GALT4O60513 344 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 NEMFO60524 1076 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 DKC1O60832 514 aaKnown RBP eCLIP6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 DTNBO60941 627 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 ATP9AO75110 1047 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 CD2BP2O95400 341 aaKnown RBP6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 TDP2O95551 362 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 RPLP2P05387 115 aaKnown RBP6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 SMIM10L2AP0DMW4 78 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 SMIM10L2BP0DMW5 78 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 CYP3A7P24462 503 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 MARK3P27448 753 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 GJB2P29033 226 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 SFNP31947 248 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 CDK7P50613 346 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 STAT5BP51692 787 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 MDM2Q00987 491 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 FPGSQ05932 587 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 FAAP100Q0VG06 881 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 PPFIA1Q13136 1202 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 NR5A1Q13285 461 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 ITGB3BPQ13352 177 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 ORC2Q13416 577 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 PPIGQ13427 754 aaKnown RBP eCLIP6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 NPY5RQ15761 445 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 CALCRLQ16602 461 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 PPP4R3AQ6IN85 833 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 PDXDC2PQ6P474 469 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 CHRDL2Q6WN34 429 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 RSPH3Q86UC2 560 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 SESTD1Q86VW0 696 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 TRIM50Q86XT4 487 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 NOSTRINQ8IVI9 506 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 RDM1Q8NG50 284 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 OXER1Q8TDS5 423 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 ATP6V0A1Q93050 837 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 FAM167AQ96KS9 214 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 FAM20AQ96MK3 541 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 C16orf70Q9BSU1 422 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 PPP1R12CQ9BZL4 782 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 UBE2OQ9C0C9 1292 aaKnown RBP6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 TRPV6Q9H1D0 765 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 MTIF3Q9H2K0 278 aaKnown RBP6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 ZNF302Q9NR11 478 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 TRMT13Q9NUP7 481 aaKnown RBP6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 HDAC6Q9UBN7 1215 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 GTF2IRD1Q9UHL9 959 aa6.1□□□□□ -1.43
HMGB1P40-201ENST00000525121 SMCHD1A6NHR9 2005 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 GRIN2DO15399 1336 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 NRCAMQ92823 1304 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 A0A1W2PPC1 479 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 GSTTP1A0A1W2PQM5 241 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 POTEB3A0JP26 581 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 RRN3P2A6NIE6 340 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 HAS3O00219 553 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 PITPNM1O00562 1244 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 ADAMTS3O15072 1205 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 MSH4O15457 936 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 LGR5O75473 907 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 PARNO95453 639 aaKnown RBP6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 TIMP1P01033 207 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 CD4P01730 458 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 ATP2B1P20020 1258 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 MAGEA10P43363 369 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 TRAPPC10P48553 1259 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 PTK7Q13308 1070 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 TMEM266Q2M3C6 531 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 LARP1BQ659C4 914 aaKnown RBP6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 GDF6Q6KF10 455 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 POTEBQ6S5H4 581 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 PLPPR4Q7Z2D5 763 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 MIER3Q7Z3K6 550 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 CAGE1Q8TC20 777 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 AFAP1L1Q8TED9 768 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 KAT2BQ92831 832 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 SLC5A5Q92911 643 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 BADQ92934 168 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 SNX21Q969T3 373 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 LENG9Q96B70 501 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 INTS4Q96HW7 963 aaKnown RBP6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 MBOAT7Q96N66 472 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 UIMC1Q96RL1 719 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 RAB34Q9BZG1 259 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 BCAS3Q9H6U6 928 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 DISC1Q9NRI5 854 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 TBX21Q9UL17 535 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 CEP131Q9UPN4 1083 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 PCDHA10Q9Y5I2 948 aa6.09□□□□□ -1.43
HMGB1P40-201ENST00000525121 COL1A2P08123 1366 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms