RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 NENFQ9UMX5 172 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 PCDHA12Q9UN75 941 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 TRAF3IP3Q9Y228 551 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDH12-203ENST00000517378 RBBP6Q7Z6E9 1792 aaKnown RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 ANKRD31Q8N7Z5 1873 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 KLRG2A4D1S0 409 aaPredicted RBP7.33□□□□□ -1.24
CDH12-203ENST00000517378 HSF2BPO75031 334 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 PLA2G4BP0C869 781 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 KLRC1P26715 233 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 SHMT1P34896 483 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 POLR2FP61218 127 aaKnown RBP7.33□□□□□ -1.24
CDH12-203ENST00000517378 SLC7A5Q01650 507 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 ATP2B2Q01814 1243 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 PAK2Q13177 524 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 TTMPQ5BVD1 217 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 DPP8Q6V1X1 898 aaPredicted RBP7.33□□□□□ -1.24
CDH12-203ENST00000517378 EFCAB13Q8IY85 973 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 SLFN12Q8IYM2 578 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 IQCKQ8N0W5 287 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 TANGO6Q9C0B7 1094 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 EHD4Q9H223 541 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 GPCPD1Q9NPB8 672 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 SMARCAL1Q9NZC9 954 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 EHD2Q9NZN4 543 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 POLLQ9UGP5 575 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 A0A087X0T9 212 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 TBX3O15119 743 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 BUB1O43683 1085 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 GLI1P08151 1106 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 FAM228BP0C875 321 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 ZBTB48P10074 688 aaPredicted RBP7.33□□□□□ -1.24
CDH12-203ENST00000517378 SPIRE1Q08AE8 756 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 AP3B2Q13367 1082 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 BMT2Q1RMZ1 405 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 MCTP2Q6DN12 878 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 EPM2AIP1Q7L775 607 aaPredicted RBP7.33□□□□□ -1.24
CDH12-203ENST00000517378 TMC4Q7Z404 712 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 FRMD5Q7Z6J6 570 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 WHAMMQ8TF30 809 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 CRAMP1Q96RY5 1269 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 CAPS2Q9BXY5 557 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 PSTPIP2Q9H939 334 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 NLRC4Q9NPP4 1024 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 DDX4Q9NQI0 724 aaKnown RBP7.33□□□□□ -1.24
CDH12-203ENST00000517378 RSPH14Q9UHP6 348 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 SERPINB13Q9UIV8 391 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 BZW2Q9Y6E2 419 aaKnown RBP7.33□□□□□ -1.24
CDH12-203ENST00000517378 PRKCIP41743 596 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 ASIC2Q16515 512 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 ARSHQ5FYA8 562 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 GPBP1Q86WP2 473 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 KCTD17Q8N5Z5 321 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 ANKRD13CQ8N6S4 541 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 USP38Q8NB14 1042 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 ETNPPLQ8TBG4 499 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 PPM1EQ8WY54 764 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 PIK3R5Q8WYR1 880 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 MS4A14Q96JA4 679 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 ZIM3Q96PE6 472 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 PSMB7Q99436 277 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 PAGR1Q9BTK6 254 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 MXD3Q9BW11 206 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 COA1Q9GZY4 146 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 EFCC1Q9HA90 598 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 EMILIN3Q9NT22 766 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 KIAA1024Q9UPX6 916 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 STK24Q9Y6E0 443 aa7.33□□□□□ -1.24
CDH12-203ENST00000517378 POTEB3A0JP26 581 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 SRRM3A6NNA2 597 aaPredicted RBP7.32□□□□□ -1.24
CDH12-203ENST00000517378 POTECB2RU33 542 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 USP17L10C9JJH3 530 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 E9PMD0 336 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 SLC16A3O15427 465 aaKnown RBP7.32□□□□□ -1.24
CDH12-203ENST00000517378 HEXIM1O94992 359 aaKnown RBP7.32□□□□□ -1.24
CDH12-203ENST00000517378 KLHL30Q0D2K2 578 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 KCNH2Q12809 1159 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 CDC37Q16543 378 aaPredicted RBP7.32□□□□□ -1.24
CDH12-203ENST00000517378 TTBK2Q6IQ55 1244 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 POTEBQ6S5H4 581 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 KDM7AQ6ZMT4 941 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 IRF2BP2Q7Z5L9 587 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 LRRC57Q8N9N7 239 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 ACTRT1Q8TDG2 376 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 TBC1D5Q92609 795 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 ZBTB9Q96C00 473 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 CALR3Q96L12 384 aaKnown RBP7.32□□□□□ -1.24
CDH12-203ENST00000517378 TRIM34Q9BYJ4 488 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 DHX36Q9H2U1 1008 aaKnown RBP7.32□□□□□ -1.24
CDH12-203ENST00000517378 A0A0A6YYK5 440 aaPredicted RBP7.32□□□□□ -1.24
CDH12-203ENST00000517378 CETN3O15182 167 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 HSPA9P38646 679 aaKnown RBP7.32□□□□□ -1.24
CDH12-203ENST00000517378 MATR3P43243 847 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDH12-203ENST00000517378 CARSP49589 748 aaKnown RBP7.32□□□□□ -1.24
CDH12-203ENST00000517378 JAM2P57087 298 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 ADAM9Q13443 819 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 RAPGEF1Q13905 1077 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 KIAA0753Q2KHM9 967 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 Q4G0T1 1027 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 CLEC10AQ8IUN9 316 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms