RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 JAG2Q9Y219 1238 aa4.61□□□□□ -1.67
RNU4-60P-201ENST00000517239 CAPN8A6NHC0 703 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZNF862O60290 1169 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 TMEM127O75204 238 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 SLITRK5O94991 958 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 FAM157BP0CG42 384 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 HTR1BP28222 390 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 CDC25BP30305 580 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 LSP1P33241 339 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 GALNSP34059 522 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 UBA7P41226 1012 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 TSPAN7P41732 249 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 CLK1P49759 484 aaKnown RBP4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 MECP2P51608 486 aaKnown RBP4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 CASP5P51878 434 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 ARL4CP56559 192 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 CABP4P57796 275 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 GPR85P60893 370 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 GPLD1P80108 840 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 TNP2Q05952 138 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 CACNB2Q08289 660 aaPredicted RBP4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 WASHC5Q12768 1159 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 PAK1Q13153 545 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 AUHQ13825 339 aaKnown RBP4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 POSTNQ15063 836 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 PDCD1Q15116 288 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 HSF5Q4G112 596 aaPredicted RBP4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 FKBP15Q5T1M5 1219 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 CFAP58Q5T655 872 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 OVCH1Q7RTY7 1134 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 ARL10Q8N8L6 244 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 FRS2Q8WU20 508 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 TRAPPC12Q8WVT3 735 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 PHKBQ93100 1093 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 WDR89Q96FK6 387 aaPredicted RBP4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 TMEM41AQ96HV5 264 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 DPH2Q9BQC3 489 aaPredicted RBP4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 NOL6Q9H6R4 1146 aaKnown RBP4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 UBN1Q9NPG3 1134 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 KRT82Q9NSB4 513 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 GRHPRQ9UBQ7 328 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 SERPINB13Q9UIV8 391 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 FBXL21Q9UKT6 434 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 HIF3AQ9Y2N7 669 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 GPR55Q9Y2T6 319 aaPredicted RBP4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 PCDHGC4Q9Y5F7 938 aa4.6□□□□□ -1.67
RNU4-60P-201ENST00000517239 LCHNA4D1U4 455 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 PABPN1LA6NDY0 278 aaKnown RBP4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 A6NLC8 198 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 SMTNL1A8MU46 457 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 B4E171 279 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 FFAR2O15552 330 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 NDUFS2O75306 463 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 UPP2O95045 317 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 ALDH2P05091 517 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 CYP11A1P05108 521 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 SCG5P05408 212 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 MAPTP10636 758 aaKnown RBP4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 OSMP13725 252 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 SLC9A1P19634 815 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 AGXTP21549 392 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 SCP2P22307 547 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 MAOBP27338 520 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 RXRBP28702 533 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZNF445P59923 1031 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 ST5P78524 1137 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 SRSF2Q01130 221 aaKnown RBP4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 PFKPQ01813 784 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 KCNC4Q03721 635 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 PRKG1Q13976 671 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 ARHGAP44Q17R89 818 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 DPY19L1Q2PZI1 675 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 PGS1Q32NB8 556 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 ANO6Q4KMQ2 910 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 FAM47CQ5HY64 1035 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 PPM1JQ5JR12 505 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 TOR2AQ5JU69 321 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 FIGNL1Q6PIW4 674 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 BRINP3Q76B58 766 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 HEATR4Q86WZ0 1026 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 COL23A1Q86Y22 540 aaPredicted RBP4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 CISD2Q8N5K1 135 aaKnown RBP4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 MSL3Q8N5Y2 521 aaKnown RBP4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZNF713Q8N859 430 aaPredicted RBP4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 PCYOX1LQ8NBM8 494 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 KREMEN2Q8NCW0 462 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 UCMAQ8WVF2 138 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZDHHC15Q96MV8 337 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 HS3ST6Q96QI5 342 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 LRFN3Q9BTN0 628 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 TTLL2Q9BWV7 592 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 SORBS1Q9BX66 1292 aaKnown RBP4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 USP26Q9BXU7 913 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 CELF4Q9BZC1 486 aaKnown RBP4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZDHHC5Q9C0B5 715 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 LMAN2LQ9H0V9 348 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 STARD7Q9NQZ5 370 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 TOMM22Q9NS69 142 aa4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.59□□□□□ -1.67
RNU4-60P-201ENST00000517239 TRIM33Q9UPN9 1127 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms