RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 KLHL18O94889 574 aa8.04□□□□□ -1.12
NUP54-209ENST00000510569 LTFP02788 710 aa8.04□□□□□ -1.12
NUP54-209ENST00000510569 NFATC3Q12968 1075 aa8.04□□□□□ -1.12
NUP54-209ENST00000510569 PUM1Q14671 1186 aaKnown RBP eCLIP8.04□□□□□ -1.12
NUP54-209ENST00000510569 NBPF6Q5VWK0 638 aa8.04□□□□□ -1.12
NUP54-209ENST00000510569 CD276Q5ZPR3 534 aa8.04□□□□□ -1.12
NUP54-209ENST00000510569 KCTD1Q719H9 257 aa8.04□□□□□ -1.12
NUP54-209ENST00000510569 KBTBD2Q8IY47 623 aa8.04□□□□□ -1.12
NUP54-209ENST00000510569 IGDCC4Q8TDY8 1250 aa8.04□□□□□ -1.12
NUP54-209ENST00000510569 NBPF4Q96M43 638 aa8.04□□□□□ -1.12
NUP54-209ENST00000510569 ALG1Q9BT22 464 aa8.04□□□□□ -1.12
NUP54-209ENST00000510569 IPPKQ9H8X2 491 aa8.04□□□□□ -1.12
NUP54-209ENST00000510569 BARX1Q9HBU1 254 aaPredicted RBP8.04□□□□□ -1.12
NUP54-209ENST00000510569 WNT9AO14904 365 aa8.03□□□□□ -1.12
NUP54-209ENST00000510569 KNG1P01042 644 aa8.03□□□□□ -1.12
NUP54-209ENST00000510569 SMAD2Q15796 467 aaKnown RBP8.03□□□□□ -1.12
NUP54-209ENST00000510569 SKIDA1Q1XH10 827 aa8.03□□□□□ -1.12
NUP54-209ENST00000510569 NAALADL2Q58DX5 795 aa8.03□□□□□ -1.12
NUP54-209ENST00000510569 MAMDC2Q7Z304 686 aaPredicted RBP8.03□□□□□ -1.12
NUP54-209ENST00000510569 LIMS2Q7Z4I7 341 aa8.03□□□□□ -1.12
NUP54-209ENST00000510569 NUDT10Q8NFP7 164 aa8.03□□□□□ -1.12
NUP54-209ENST00000510569 NUDT11Q96G61 164 aa8.03□□□□□ -1.12
NUP54-209ENST00000510569 CCDC113Q9H0I3 377 aa8.03□□□□□ -1.12
NUP54-209ENST00000510569 ZNF839A8K0R7 811 aa8.02□□□□□ -1.13
NUP54-209ENST00000510569 U2SURPO15042 1029 aaKnown RBP8.02□□□□□ -1.13
NUP54-209ENST00000510569 TNFRSF1AP19438 455 aa8.02□□□□□ -1.13
NUP54-209ENST00000510569 PPP2CBP62714 309 aa8.02□□□□□ -1.13
NUP54-209ENST00000510569 PPP2CAP67775 309 aa8.02□□□□□ -1.13
NUP54-209ENST00000510569 SCUBE1Q8IWY4 988 aa8.02□□□□□ -1.13
NUP54-209ENST00000510569 KCND1Q9NSA2 647 aa8.02□□□□□ -1.13
NUP54-209ENST00000510569 ZFP69BQ9UJL9 534 aa8.02□□□□□ -1.13
NUP54-209ENST00000510569 E9PSI1 815 aa8.01□□□□□ -1.13
NUP54-209ENST00000510569 ACOT7O00154 380 aa8.01□□□□□ -1.13
NUP54-209ENST00000510569 CKMP06732 381 aa8.01□□□□□ -1.13
NUP54-209ENST00000510569 ENO2P09104 434 aaPredicted RBP8.01□□□□□ -1.13
NUP54-209ENST00000510569 PHF19Q5T6S3 580 aa8.01□□□□□ -1.13
NUP54-209ENST00000510569 ARHGEF18Q6ZSZ5 1173 aa8.01□□□□□ -1.13
NUP54-209ENST00000510569 DNERQ8NFT8 737 aa8.01□□□□□ -1.13
NUP54-209ENST00000510569 SH3RF2Q8TEC5 729 aa8.01□□□□□ -1.13
NUP54-209ENST00000510569 DVL3Q92997 716 aaPredicted RBP8.01□□□□□ -1.13
NUP54-209ENST00000510569 TRAF6Q9Y4K3 522 aa8.01□□□□□ -1.13
NUP54-209ENST00000510569 TCRBV5S4A2TA0A5A2 114 aa8□□□□□ -1.13
NUP54-209ENST00000510569 AQP7O14520 342 aa8□□□□□ -1.13
NUP54-209ENST00000510569 GPR42O15529 346 aa8□□□□□ -1.13
NUP54-209ENST00000510569 C6orf222P0C671 652 aaPredicted RBP8□□□□□ -1.13
NUP54-209ENST00000510569 SUMO1P63165 101 aaKnown RBP8□□□□□ -1.13
NUP54-209ENST00000510569 PFKPQ01813 784 aa8□□□□□ -1.13
NUP54-209ENST00000510569 MTERF2Q49AM1 385 aa8□□□□□ -1.13
NUP54-209ENST00000510569 Q6ZUG5 572 aa8□□□□□ -1.13
NUP54-209ENST00000510569 ZBTB38Q8NAP3 1195 aaPredicted RBP8□□□□□ -1.13
NUP54-209ENST00000510569 PTPRN2Q92932 1015 aa8□□□□□ -1.13
NUP54-209ENST00000510569 AJUBAQ96IF1 538 aa8□□□□□ -1.13
NUP54-209ENST00000510569 MEGF9Q9H1U4 602 aa8□□□□□ -1.13
NUP54-209ENST00000510569 CD248Q9HCU0 757 aa8□□□□□ -1.13
NUP54-209ENST00000510569 ARHGAP20Q9P2F6 1191 aa8□□□□□ -1.13
NUP54-209ENST00000510569 ST6GALNAC2Q9UJ37 374 aa8□□□□□ -1.13
NUP54-209ENST00000510569 SRPK3Q9UPE1 567 aa8□□□□□ -1.13
NUP54-209ENST00000510569 TRBV23-1A0A0A0MS06 115 aa7.99□□□□□ -1.13
NUP54-209ENST00000510569 NPEPPSL1A6NEC2 478 aa7.99□□□□□ -1.13
NUP54-209ENST00000510569 MATN3O15232 486 aa7.99□□□□□ -1.13
NUP54-209ENST00000510569 FBXO21O94952 628 aa7.99□□□□□ -1.13
NUP54-209ENST00000510569 SSRP1Q08945 709 aaKnown RBP7.99□□□□□ -1.13
NUP54-209ENST00000510569 PAK1Q13153 545 aa7.99□□□□□ -1.13
NUP54-209ENST00000510569 ICAM4Q14773 271 aa7.99□□□□□ -1.13
NUP54-209ENST00000510569 SLFN13Q68D06 897 aa7.99□□□□□ -1.13
NUP54-209ENST00000510569 CIR1Q86X95 450 aaPredicted RBP7.99□□□□□ -1.13
NUP54-209ENST00000510569 REXO1L1PQ8IX06 675 aa7.99□□□□□ -1.13
NUP54-209ENST00000510569 CHST13Q8NET6 341 aa7.99□□□□□ -1.13
NUP54-209ENST00000510569 CD244Q9BZW8 370 aa7.99□□□□□ -1.13
NUP54-209ENST00000510569 FOXB2Q5VYV0 432 aa7.98□□□□□ -1.13
NUP54-209ENST00000510569 RALYLQ86SE5 291 aaKnown RBP7.98□□□□□ -1.13
NUP54-209ENST00000510569 STPG3Q8N7X2 389 aa7.98□□□□□ -1.13
NUP54-209ENST00000510569 KATNBL1Q9H079 304 aa7.98□□□□□ -1.13
NUP54-209ENST00000510569 SIRPGQ9P1W8 387 aa7.98□□□□□ -1.13
NUP54-209ENST00000510569 ARVCFO00192 962 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 B4GALT4O60513 344 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 IL18BPO95998 194 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 CSF2RBP32927 897 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 GLRBP48167 497 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 SERINC3Q13530 473 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 CDSNQ15517 529 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 GPR19Q15760 415 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 FAM209AQ5JX71 171 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 MTDHQ86UE4 582 aaKnown RBP7.97□□□□□ -1.13
NUP54-209ENST00000510569 NLGN4XQ8N0W4 816 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 CDC6Q99741 560 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 TMPRSS5Q9H3S3 457 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 PFDN2Q9UHV9 154 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 TSC22D4Q9Y3Q8 395 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 SLC4A7Q9Y6M7 1214 aa7.97□□□□□ -1.13
NUP54-209ENST00000510569 PATE3B3GLJ2 98 aa7.96□□□□□ -1.14
NUP54-209ENST00000510569 DIAPH1O60610 1272 aaKnown RBP7.96□□□□□ -1.14
NUP54-209ENST00000510569 CNOT4O95628 575 aaKnown RBP7.96□□□□□ -1.14
NUP54-209ENST00000510569 ATP2B1P20020 1258 aa7.96□□□□□ -1.14
NUP54-209ENST00000510569 DBPQ10586 325 aaPredicted RBP7.96□□□□□ -1.14
NUP54-209ENST00000510569 LONRF2Q1L5Z9 754 aa7.96□□□□□ -1.14
NUP54-209ENST00000510569 FIGNQ5HY92 759 aa7.96□□□□□ -1.14
NUP54-209ENST00000510569 PCDH19Q8TAB3 1148 aa7.96□□□□□ -1.14
NUP54-209ENST00000510569 EXOC2Q96KP1 924 aa7.96□□□□□ -1.14
NUP54-209ENST00000510569 C8orf37Q96NL8 207 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms