RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 PALM2Q8IXS6 379 aa7.06□□□□□ -1.28
LINC01088-205ENST00000509088 UHMK1Q8TAS1 419 aaKnown RBP7.06□□□□□ -1.28
LINC01088-205ENST00000509088 Q8TCH9 128 aa7.06□□□□□ -1.28
LINC01088-205ENST00000509088 KRIT1O00522 736 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 FAHP16930 419 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 SELENOPP49908 381 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 ARID5AQ03989 594 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 TUSC3Q13454 348 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 GNL2Q13823 731 aaKnown RBP7.05□□□□□ -1.28
LINC01088-205ENST00000509088 VASNQ6EMK4 673 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 KCNT2Q6UVM3 1135 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 RSPO2Q6UXX9 243 aaPredicted RBP7.05□□□□□ -1.28
LINC01088-205ENST00000509088 Q6ZUG5 572 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 USP53Q70EK8 1073 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 MCF2L2Q86YR7 1114 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 HNRNPLLQ8WVV9 542 aaKnown RBP7.05□□□□□ -1.28
LINC01088-205ENST00000509088 SREK1Q8WXA9 508 aaKnown RBP7.05□□□□□ -1.28
LINC01088-205ENST00000509088 BARX1Q9HBU1 254 aaPredicted RBP7.05□□□□□ -1.28
LINC01088-205ENST00000509088 KCND1Q9NSA2 647 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 ZDHHC9Q9Y397 364 aa7.05□□□□□ -1.28
LINC01088-205ENST00000509088 SUV39H1O43463 412 aa7.04□□□□□ -1.28
LINC01088-205ENST00000509088 MAFKO60675 156 aa7.04□□□□□ -1.28
LINC01088-205ENST00000509088 CKMP06732 381 aa7.04□□□□□ -1.28
LINC01088-205ENST00000509088 CSF2RBP32927 897 aa7.04□□□□□ -1.28
LINC01088-205ENST00000509088 SMAD2Q15796 467 aaKnown RBP7.04□□□□□ -1.28
LINC01088-205ENST00000509088 SKIDA1Q1XH10 827 aa7.04□□□□□ -1.28
LINC01088-205ENST00000509088 TRIM48Q8IWZ4 208 aa7.04□□□□□ -1.28
LINC01088-205ENST00000509088 AJUBAQ96IF1 538 aa7.04□□□□□ -1.28
LINC01088-205ENST00000509088 CDK5RAP1Q96SZ6 601 aaKnown RBP7.04□□□□□ -1.28
LINC01088-205ENST00000509088 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.04□□□□□ -1.28
LINC01088-205ENST00000509088 ARHGEF4Q9NR80 690 aa7.04□□□□□ -1.28
LINC01088-205ENST00000509088 SLC4A7Q9Y6M7 1214 aa7.04□□□□□ -1.28
LINC01088-205ENST00000509088 NKRFO15226 690 aaKnown RBP eCLIP7.03□□□□□ -1.28
LINC01088-205ENST00000509088 ZNF623O75123 536 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 IL18BPO95998 194 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 COL6A2P12110 1019 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 GRK2P25098 689 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 GRK3P35626 688 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 PAN2Q504Q3 1202 aaKnown RBP7.03□□□□□ -1.28
LINC01088-205ENST00000509088 SPDYAQ5MJ70 313 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 LBX2Q6XYB7 198 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 OSBP2Q969R2 916 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 TANGO6Q9C0B7 1094 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 VPS11Q9H270 941 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 JADE2Q9NQC1 790 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 ZFP69BQ9UJL9 534 aa7.03□□□□□ -1.28
LINC01088-205ENST00000509088 ACOT7O00154 380 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 FOXS1O43638 330 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 AMHP03971 560 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 CHGBP05060 677 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 CD276Q5ZPR3 534 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 GPR155Q7Z3F1 870 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 VPS37DQ86XT2 251 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 ZFPM1Q8IX07 1006 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 GNRHR2Q96P88 292 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 KATNBL1Q9H079 304 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 ST7Q9NRC1 585 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 PTPN22Q9Y2R2 807 aa7.02□□□□□ -1.29
LINC01088-205ENST00000509088 CYR61O00622 381 aa7.01□□□□□ -1.29
LINC01088-205ENST00000509088 GDF5P43026 501 aa7.01□□□□□ -1.29
LINC01088-205ENST00000509088 EPHA5P54756 1037 aa7.01□□□□□ -1.29
LINC01088-205ENST00000509088 PFKPQ01813 784 aa7.01□□□□□ -1.29
LINC01088-205ENST00000509088 DDR2Q16832 855 aa7.01□□□□□ -1.29
LINC01088-205ENST00000509088 RALYLQ86SE5 291 aaKnown RBP7.01□□□□□ -1.29
LINC01088-205ENST00000509088 STPG3Q8N7X2 389 aa7.01□□□□□ -1.29
LINC01088-205ENST00000509088 SH3RF2Q8TEC5 729 aa7.01□□□□□ -1.29
LINC01088-205ENST00000509088 DEF6Q9H4E7 631 aa7.01□□□□□ -1.29
LINC01088-205ENST00000509088 SEC61A2Q9H9S3 476 aa7.01□□□□□ -1.29
LINC01088-205ENST00000509088 USP35Q9P2H5 1018 aa7.01□□□□□ -1.29
LINC01088-205ENST00000509088 PPP1R1BQ9UD71 204 aaPredicted RBP7.01□□□□□ -1.29
LINC01088-205ENST00000509088 TESMINQ9Y4I5 508 aa7.01□□□□□ -1.29
LINC01088-205ENST00000509088 ZNF839A8K0R7 811 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 AGRPO00253 132 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 MUSKO15146 869 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 KLF4O43474 513 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 FGFR1P11362 822 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 GLRBP48167 497 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 YOD1Q5VVQ6 348 aaPredicted RBP7□□□□□ -1.29
LINC01088-205ENST00000509088 TCTN3Q6NUS6 607 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 DCAF4Q8WV16 495 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 SGSM3Q96HU1 749 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 DRC1Q96MC2 740 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 AARSD1Q9BTE6 412 aaKnown RBP7□□□□□ -1.29
LINC01088-205ENST00000509088 TCAF1Q9Y4C2 921 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 ASXL2Q76L83 1435 aa7□□□□□ -1.29
LINC01088-205ENST00000509088 TCRBV5S4A2TA0A5A2 114 aa6.99□□□□□ -1.29
LINC01088-205ENST00000509088 BLACEA4D250 179 aa6.99□□□□□ -1.29
LINC01088-205ENST00000509088 PRODHO43272 600 aa6.99□□□□□ -1.29
LINC01088-205ENST00000509088 HMGA2P52926 109 aa6.99□□□□□ -1.29
LINC01088-205ENST00000509088 GPR85P60893 370 aa6.99□□□□□ -1.29
LINC01088-205ENST00000509088 KIZQ2M2Z5 673 aa6.99□□□□□ -1.29
LINC01088-205ENST00000509088 STYK1Q6J9G0 422 aa6.99□□□□□ -1.29
LINC01088-205ENST00000509088 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.99□□□□□ -1.29
LINC01088-205ENST00000509088 KCNJ15Q99712 375 aa6.99□□□□□ -1.29
LINC01088-205ENST00000509088 PCED1AQ9H1Q7 454 aa6.99□□□□□ -1.29
LINC01088-205ENST00000509088 ARHGAP20Q9P2F6 1191 aa6.99□□□□□ -1.29
LINC01088-205ENST00000509088 MYO15BQ96JP2 1530 aa6.98□□□□□ -1.29
LINC01088-205ENST00000509088 FZD7O75084 574 aa6.98□□□□□ -1.29
LINC01088-205ENST00000509088 ZNF888P0CJ79 500 aaPredicted RBP6.98□□□□□ -1.29
LINC01088-205ENST00000509088 GNAT1P11488 350 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms