RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 FMNL3Q8IVF7 1028 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 MRRFQ96E11 262 aaKnown RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 DHTKD1Q96HY7 919 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 SLC12A6Q9UHW9 1150 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 SIK3Q9Y2K2 1263 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 RTL9Q8NET4 1388 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 C4AP0C0L4 1744 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 C4BP0C0L5 1744 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 CREB1P16220 341 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 FGFR4P22455 802 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 PRDX5P30044 214 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 NAPAP54920 295 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 GLE1Q53GS7 698 aaKnown RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 WLSQ5T9L3 541 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 PDXDC1Q6P996 788 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 PEX26Q7Z412 305 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 SPATS2Q86XZ4 545 aaKnown RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 METTL13Q8N6R0 699 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 C4orf32Q8N8J7 132 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 CHMP6Q96FZ7 201 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 PSMD1Q99460 953 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 NOC2LQ9Y3T9 749 aaKnown RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 CCT8L1PA6NM43 557 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 IGF2BP3O00425 579 aaKnown RBP eCLIP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 C21orf2O43822 256 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 FGGP02679 453 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 SLC9A1P19634 815 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 CRKLP46109 303 aaKnown RBP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 CRYMQ14894 314 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 ERFEQ4G0M1 354 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 CAPRIN2Q6IMN6 1127 aaKnown RBP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 PPP4R3AQ6IN85 833 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 TRMT1LQ7Z2T5 733 aaKnown RBP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 VGLL2Q8N8G2 317 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 EPS8L3Q8TE67 593 aaKnown RBP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 WHAMMQ8TF30 809 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 CCT6BQ92526 530 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 BAP1Q92560 729 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 XPO6Q96QU8 1125 aaKnown RBP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 ACTR5Q9H9F9 607 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 INTS9Q9NV88 658 aaKnown RBP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 SAMD15Q9P1V8 674 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 TBK1Q9UHD2 729 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 ABCC12Q96J65 1359 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 RIC1Q4ADV7 1423 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 DRD4P21917 467 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 SLC8A1P32418 973 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 ALX1Q15699 326 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 MAN2A1Q16706 1144 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 RUFY4Q6ZNE9 571 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 BZW1Q7L1Q6 419 aaKnown RBP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 KCNK18Q7Z418 384 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 SLC51AQ86UW1 340 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 ANKS4BQ8N8V4 417 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 TATDN2Q93075 761 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 LRRC45Q96CN5 670 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 INPP4AQ96PE3 977 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 ERGIC2Q96RQ1 377 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 FGFR1OP2Q9NVK5 253 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 KBTBD4Q9NVX7 518 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 TMOD4Q9NZQ9 345 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 PCDHA6Q9UN73 950 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 PCDHA8Q9Y5H6 950 aa8.32□□□□□ -1.08
NEDD9-208ENST00000504387 MED1Q15648 1581 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 N4BP2Q86UW6 1770 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-208ENST00000504387 TSPY3P0CV98 308 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 TSPY8P0CW00 308 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 GNAT2P19087 354 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 YY1P25490 414 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 VPS41P49754 854 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 ALDH5A1P51649 535 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 PTK2Q05397 1052 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 DIXDC1Q155Q3 683 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 PFKFB3Q16875 520 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 EAPPQ56P03 285 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 HGSNATQ68CP4 663 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 SV2BQ7L1I2 683 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 MAPKAPK5Q8IW41 473 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 ZNF444Q8N0Y2 327 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 U2AF1L4Q8WU68 220 aaKnown RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 KLHL29Q96CT2 875 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 CALML4Q96GE6 196 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 ZNF570Q96NI8 536 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 IKZF4Q9H2S9 585 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 OSGEPQ9NPF4 335 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 G3BP2Q9UN86 482 aaKnown RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 TRPC6Q9Y210 931 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 MARF1Q9Y4F3 1742 aaKnown RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 C5P01031 1676 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 KCNQ2O43526 872 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 ECHS1P30084 290 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 HSPA9P38646 679 aaKnown RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 ASIC2Q16515 512 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 USP17L2Q6R6M4 530 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 YTHDF3Q7Z739 585 aaKnown RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 PNMA1Q8ND90 353 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 ARMC2Q8NEN0 867 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 ANKS1AQ92625 1134 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 DDX12PQ92771 950 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms