RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 ICAM1P05362 532 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 CCDC192P0DO97 292 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 GCFC2P16383 781 aaKnown RBP8.67□□□□□ -1.02
CDC42-205ENST00000498236 VCAM1P19320 739 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 CYP3A7P24462 503 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 MCM7P33993 719 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 NF2P35240 595 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 DEKP35659 375 aaKnown RBP8.67□□□□□ -1.02
CDC42-205ENST00000498236 USP11P51784 963 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 GHRHRQ02643 423 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 SPP2Q13103 211 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 JAKMIP3Q5VZ66 844 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 MOXD1Q6UVY6 613 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.67□□□□□ -1.02
CDC42-205ENST00000498236 CCDC84Q86UT8 332 aaPredicted RBP8.67□□□□□ -1.02
CDC42-205ENST00000498236 SAMD3Q8N6K7 520 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 CRYGNQ8WXF5 182 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 AK8Q96MA6 479 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 PYM1Q9BRP8 204 aaKnown RBP8.67□□□□□ -1.02
CDC42-205ENST00000498236 MAF1Q9H063 256 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 CSRNP2Q9H175 543 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 GRPEL1Q9HAV7 217 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 USP25Q9UHP3 1055 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 SERTAD1Q9UHV2 236 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 MRPL11Q9Y3B7 192 aaKnown RBP8.67□□□□□ -1.02
CDC42-205ENST00000498236 AFG3L2Q9Y4W6 797 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 ZHX2Q9Y6X8 837 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 PHIPQ8WWQ0 1821 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 MYPNQ86TC9 1320 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 EDIL3O43854 480 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 NEMFO60524 1076 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 CCNT1O60563 726 aaKnown RBP8.66□□□□□ -1.02
CDC42-205ENST00000498236 ADH1AP07327 375 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 IREB2P48200 963 aaKnown RBP8.66□□□□□ -1.02
CDC42-205ENST00000498236 GRIN1Q05586 938 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 VGLL4Q14135 290 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 ZYXQ15942 572 aaKnown RBP8.66□□□□□ -1.02
CDC42-205ENST00000498236 IL17AQ16552 155 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 CAMK4Q16566 473 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 KANK3Q6NY19 840 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 DTHD1Q6ZMT9 781 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 TNS4Q8IZW8 715 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 CDCA5Q96FF9 252 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 MBOAT7Q96N66 472 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 MTMR9Q96QG7 549 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 SDF4Q9BRK5 362 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 SLC38A10Q9HBR0 1119 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 FBXO28Q9NVF7 368 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 TMEM260Q9NX78 707 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 MAP3K20Q9NYL2 800 aaKnown RBP8.66□□□□□ -1.02
CDC42-205ENST00000498236 PPP1R9AQ9ULJ8 1098 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 ADAMTS5Q9UNA0 930 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 MRVI1Q9Y6F6 885 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 SNCAIPQ9Y6H5 919 aa8.66□□□□□ -1.02
CDC42-205ENST00000498236 POLR2AP24928 1970 aaKnown RBP8.66□□□□□ -1.02
CDC42-205ENST00000498236 ZNF536O15090 1300 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 SRCAPQ6ZRS2 3230 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 ATP2A1O14983 1001 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 CYP3A4P08684 503 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 OR52Z1P0C646 297 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 XRCC6P12956 609 aaKnown RBP eCLIP8.65□□□□□ -1.023e-11■□□□□ 9.2
CDC42-205ENST00000498236 IGFBP4P22692 258 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 CIITAP33076 1130 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 SREBF1P36956 1147 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 OAZ1P54368 228 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 PPATQ06203 517 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 TYRO3Q06418 890 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 UBE2SQ16763 222 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 LETM2Q2VYF4 491 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 USP17L6PQ6QN14 398 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 SASS6Q6UVJ0 657 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 KRBA2Q6ZNG9 492 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 LDHDQ86WU2 507 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 ITPKCQ96DU7 683 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 CCDC34Q96HJ3 373 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 ANO3Q9BYT9 981 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 RBSNQ9H1K0 784 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 TMEM60Q9H2L4 133 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 RPAP3Q9H6T3 665 aaPredicted RBP8.65□□□□□ -1.02
CDC42-205ENST00000498236 HOOK1Q9UJC3 728 aaKnown RBP8.65□□□□□ -1.02
CDC42-205ENST00000498236 CSADQ9Y600 493 aa8.65□□□□□ -1.02
CDC42-205ENST00000498236 VWA3AA6NCI4 1184 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 FAM181BA6NEQ2 426 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 SPDYE3A6NKU9 549 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 GCOM1H8Y6P7 765 aaPredicted RBP8.64□□□□□ -1.03
CDC42-205ENST00000498236 VWA5AO00534 786 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 CXCL11O14625 94 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 TBX3O15119 743 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 SLC26A4O43511 780 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 ZBED4O75132 1171 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 FLOT1O75955 427 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 ZIC2O95409 532 aaPredicted RBP8.64□□□□□ -1.03
CDC42-205ENST00000498236 SLFN14P0C7P3 912 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 POLR2MP0CAP2 368 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 SCNN1AP37088 669 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 HSD17B4P51659 736 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 EPHA4P54764 986 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 HMGCS2P54868 508 aa8.64□□□□□ -1.03
CDC42-205ENST00000498236 WDR4P57081 412 aaKnown RBP8.64□□□□□ -1.03
CDC42-205ENST00000498236 SNAP25P60880 206 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms