RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 TINF2Q9BSI4 451 aa5.1□□□□□ -1.59
PHC3-216ENST00000497171 TANGO6Q9C0B7 1094 aa5.1□□□□□ -1.59
PHC3-216ENST00000497171 HSPBP1Q9NZL4 362 aa5.1□□□□□ -1.59
PHC3-216ENST00000497171 APEX2Q9UBZ4 518 aa5.1□□□□□ -1.59
PHC3-216ENST00000497171 DGCR2P98153 550 aa5.09□□□□□ -1.59
PHC3-216ENST00000497171 SF3A1Q15459 793 aaKnown RBP5.09□□□□□ -1.59
PHC3-216ENST00000497171 CYP4F22Q6NT55 531 aa5.09□□□□□ -1.59
PHC3-216ENST00000497171 DTX3Q8N9I9 347 aa5.09□□□□□ -1.59
PHC3-216ENST00000497171 ZNF483Q8TF39 744 aaPredicted RBP5.09□□□□□ -1.59
PHC3-216ENST00000497171 GPRASP2Q96D09 838 aa5.09□□□□□ -1.59
PHC3-216ENST00000497171 DRC1Q96MC2 740 aa5.09□□□□□ -1.59
PHC3-216ENST00000497171 AURKAIP1Q9NWT8 199 aaPredicted RBP5.09□□□□□ -1.59
PHC3-216ENST00000497171 CLDND1Q9NY35 253 aa5.09□□□□□ -1.59
PHC3-216ENST00000497171 NUB1Q9Y5A7 615 aa5.09□□□□□ -1.59
PHC3-216ENST00000497171 PCDHA2Q9Y5H9 948 aa5.09□□□□□ -1.59
PHC3-216ENST00000497171 TNFRSF18Q9Y5U5 241 aa5.09□□□□□ -1.59
PHC3-216ENST00000497171 SNRPB2P08579 225 aaKnown RBP5.08□□□□□ -1.6
PHC3-216ENST00000497171 C1SP09871 688 aa5.08□□□□□ -1.6
PHC3-216ENST00000497171 ATXN1P54253 815 aaKnown RBP5.08□□□□□ -1.6
PHC3-216ENST00000497171 ARID5AQ03989 594 aa5.08□□□□□ -1.6
PHC3-216ENST00000497171 TTLL11Q8NHH1 800 aa5.08□□□□□ -1.6
PHC3-216ENST00000497171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.08□□□□□ -1.6
PHC3-216ENST00000497171 CARD11Q9BXL7 1154 aa5.08□□□□□ -1.6
PHC3-216ENST00000497171 ARHGAP20Q9P2F6 1191 aa5.08□□□□□ -1.6
PHC3-216ENST00000497171 ZFP69BQ9UJL9 534 aa5.08□□□□□ -1.6
PHC3-216ENST00000497171 SLC30A1Q9Y6M5 507 aa5.08□□□□□ -1.6
PHC3-216ENST00000497171 H0Y858 1186 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 CPP00450 1065 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 KNG1P01042 644 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 ATP2B1P20020 1258 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 CR2P20023 1033 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 ACRV1P26436 265 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 HOXC12P31275 282 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 GTF2F1P35269 517 aaKnown RBP eCLIP5.07□□□□□ -1.6
PHC3-216ENST00000497171 LTBRP36941 435 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 ECI1P42126 302 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 GIPRP48546 466 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 ZMAT1Q5H9K5 638 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 ACBD5Q5T8D3 534 aaPredicted RBP5.07□□□□□ -1.6
PHC3-216ENST00000497171 CACTINQ8WUQ7 758 aaKnown RBP5.07□□□□□ -1.6
PHC3-216ENST00000497171 OR14A2Q96R54 314 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.07□□□□□ -1.6
PHC3-216ENST00000497171 OAZ3Q9UMX2 235 aa5.07□□□□□ -1.6
PHC3-216ENST00000497171 REXO2Q9Y3B8 237 aaKnown RBP5.07□□□□□ -1.6
PHC3-216ENST00000497171 CDC14BO60729 498 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 RAMP2O60895 175 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 SSBP05455 408 aaKnown RBP eCLIP5.06□□□□□ -1.6
PHC3-216ENST00000497171 HHEXQ03014 270 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 NCAPHQ15003 741 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 SKIDA1Q1XH10 827 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 PHF19Q5T6S3 580 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 LDLRAD3Q86YD5 345 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 PPIL6Q8IXY8 311 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 ZNF513Q8N8E2 541 aaPredicted RBP5.06□□□□□ -1.6
PHC3-216ENST00000497171 BTN2A2Q8WVV5 523 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 NAF1Q96HR8 494 aaKnown RBP5.06□□□□□ -1.6
PHC3-216ENST00000497171 CCDC140Q96MF4 163 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 PRRX2Q99811 253 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 KATNBL1Q9H079 304 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 MMRN2Q9H8L6 949 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 GINM1Q9NU53 330 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 RBPJLQ9UBG7 517 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 ASH2LQ9UBL3 628 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 EFR3BQ9Y2G0 817 aa5.06□□□□□ -1.6
PHC3-216ENST00000497171 U2SURPO15042 1029 aaKnown RBP5.05□□□□□ -1.6
PHC3-216ENST00000497171 KCNJ6P48051 423 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 GJA8P48165 433 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 GLRBP48167 497 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 NASPP49321 788 aaPredicted RBP5.05□□□□□ -1.6
PHC3-216ENST00000497171 CCDC103Q8IW40 242 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 STPG3Q8N7X2 389 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 SLC43A3Q8NBI5 491 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 RCBTB1Q8NDN9 531 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 CPLX3Q8WVH0 158 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 VOPP1Q96AW1 172 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 MRGPRX3Q96LB0 322 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 C12orf65Q9H3J6 166 aaKnown RBP5.05□□□□□ -1.6
PHC3-216ENST00000497171 MSL2Q9HCI7 577 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 LRP2BPQ9P2M1 347 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 WASF3Q9UPY6 502 aa5.05□□□□□ -1.6
PHC3-216ENST00000497171 CUTAO60888 179 aa5.04□□□□□ -1.6
PHC3-216ENST00000497171 CKMP06732 381 aa5.04□□□□□ -1.6
PHC3-216ENST00000497171 ENO2P09104 434 aaPredicted RBP5.04□□□□□ -1.6
PHC3-216ENST00000497171 ATF4P18848 351 aaPredicted RBP5.04□□□□□ -1.6
PHC3-216ENST00000497171 RPS19P39019 145 aaKnown RBP5.04□□□□□ -1.6
PHC3-216ENST00000497171 SOX9P48436 509 aa5.04□□□□□ -1.6
PHC3-216ENST00000497171 GRIN1Q05586 938 aa5.04□□□□□ -1.6
PHC3-216ENST00000497171 IL17DQ8TAD2 202 aa5.04□□□□□ -1.6
PHC3-216ENST00000497171 FBXL7Q9UJT9 491 aa5.04□□□□□ -1.6
PHC3-216ENST00000497171 NR2E1Q9Y466 385 aa5.04□□□□□ -1.6
PHC3-216ENST00000497171 DMRT1Q9Y5R6 373 aa5.04□□□□□ -1.6
PHC3-216ENST00000497171 ITGAVP06756 1048 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 ZNF888P0CJ79 500 aaPredicted RBP5.03□□□□□ -1.6
PHC3-216ENST00000497171 HIBADHP31937 336 aaKnown RBP5.03□□□□□ -1.6
PHC3-216ENST00000497171 CASP7P55210 303 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 CSRP2Q16527 193 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 MAMDC4Q6UXC1 1216 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 SCUBE1Q8IWY4 988 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 PMFBP1Q8TBY8 1022 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms