RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 COL4A6Q14031 1691 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 WDR19Q8NEZ3 1342 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 LOC102724159A0A0B4J2E5 919 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 H3BQ06 376 aaPredicted RBP8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 GJB5O95377 273 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 GH1P01241 217 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 CXCL10P02778 98 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 TOP1P11387 765 aaKnown RBP8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 FECHP22830 423 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 SSTR3P32745 418 aaPredicted RBP8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 ERVK-21P61565 698 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 ZNF543Q08ER8 600 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 PWP2Q15269 919 aaKnown RBP8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 TRIM71Q2Q1W2 868 aaKnown RBP8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 LRRFIP1Q32MZ4 808 aaKnown RBP8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 ZNF618Q5T7W0 954 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 CCDC62Q6P9F0 684 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 FAM178BQ8IXR5 827 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 DNERQ8NFT8 737 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 ANKS1AQ92625 1134 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 MRGPRX2Q96LB1 330 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 TAAR1Q96RJ0 339 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 UIMC1Q96RL1 719 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 CRBNQ96SW2 442 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 ZKSCAN3Q9BRR0 538 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 UBA5Q9GZZ9 404 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 CHMP4BQ9H444 224 aaKnown RBP8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 TSHZ2Q9NRE2 1034 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 GTF2IRD1Q9UHL9 959 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 ANAPC4Q9UJX5 808 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 RCAN3Q9UKA8 241 aa8.13□□□□□ -1.11
CHCHD3-206ENST00000496427 TECTAO75443 2155 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 NEDD4P46934 1319 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 SALL3Q9BXA9 1300 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 A0A0D9SFI3 127 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 KPNA6O60684 536 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 SNRPBP14678 240 aaKnown RBP8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 EIF2AK2P19525 551 aaKnown RBP8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 CDC37Q16543 378 aaPredicted RBP8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 LEXMQ3ZCV2 418 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 PTCRAQ6ISU1 281 aaPredicted RBP8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 RNF19BQ6ZMZ0 732 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 EP400NLQ6ZTU2 488 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 ZNF589Q86UQ0 364 aaPredicted RBP8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 SESTD1Q86VW0 696 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 TBC1D10CQ8IV04 446 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 MYOCDQ8IZQ8 938 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 GJD3Q8N144 294 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 SYTL5Q8TDW5 730 aaPredicted RBP8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 FAM227BQ96M60 508 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 MPHOSPH6Q99547 160 aaKnown RBP8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 RAD9AQ99638 391 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 OSBPL7Q9BZF2 842 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 LMCD1Q9NZU5 365 aa8.12□□□□□ -1.11
CHCHD3-206ENST00000496427 WDR81Q562E7 1941 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 FNDC1Q4ZHG4 1894 aaPredicted RBP8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 TRIOO75962 3097 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 PRR33A8MZF0 331 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 CSPG5O95196 566 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 FGAP02671 866 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 FGRP09769 529 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 SNHG28P0DPA3 235 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 MX1P20591 662 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 CASTP20810 708 aaKnown RBP8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 RBL2Q08999 1139 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 KIAA0753Q2KHM9 967 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 C7orf31Q8N865 590 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 PIEZO1Q92508 2521 aa8.11□□□□□ -1.11
CHCHD3-206ENST00000496427 TTC3P53804 2025 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 EVPLQ92817 2033 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 ABHD14A-ACY1A0A1B0GW23 586 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 J3QL48 77 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 HAS3O00219 553 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 LGR5O75473 907 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 UPP2O95045 317 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 F2P00734 622 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 CTSHP09668 335 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 MRE11P49959 708 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 NHLH1Q02575 133 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 NMIQ13287 307 aaPredicted RBP8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 PTK7Q13308 1070 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 IKBKEQ14164 716 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 CLUL1Q15846 466 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 DGKDQ16760 1214 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 CSPP1Q1MSJ5 1256 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 TCEAL5Q5H9L2 206 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 NPAS3Q8IXF0 933 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 DBF4BQ8NFT6 615 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 GPKOWQ92917 476 aaPredicted RBP eCLIP8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 RMDN3Q96TC7 470 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 TCP11L1Q9NUJ3 509 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 DDX41Q9UJV9 622 aaKnown RBP8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 PCDHB15Q9Y5E8 787 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 MRVI1Q9Y6F6 885 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 PLXNA3P51805 1871 aa8.1□□□□□ -1.11
CHCHD3-206ENST00000496427 ABCB11O95342 1321 aa8.09□□□□□ -1.11
CHCHD3-206ENST00000496427 B4DLN1 442 aa8.09□□□□□ -1.11
CHCHD3-206ENST00000496427 CFBP00751 764 aa8.09□□□□□ -1.11
CHCHD3-206ENST00000496427 AMHP03971 560 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms