RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 NECTIN1Q15223 517 aa26.7■■□□□ 1.86
COL27A1-208ENST00000494780 CREB3L3Q68CJ9 461 aa26.7■■□□□ 1.86
COL27A1-208ENST00000494780 LMBR1Q8WVP7 490 aa26.7■■□□□ 1.86
COL27A1-208ENST00000494780 KCNA2P16389 499 aa26.69■■□□□ 1.86
COL27A1-208ENST00000494780 COL9A3Q14050 684 aaPredicted RBP26.69■■□□□ 1.86
COL27A1-208ENST00000494780 FAM26DQ5JW98 314 aa26.69■■□□□ 1.86
COL27A1-208ENST00000494780 APBB2Q92870 758 aa26.69■■□□□ 1.86
COL27A1-208ENST00000494780 REV3LO60673 3130 aa26.68■■□□□ 1.86
COL27A1-208ENST00000494780 ATP9AO75110 1047 aa26.68■■□□□ 1.86
COL27A1-208ENST00000494780 TCF7P36402 384 aaPredicted RBP26.68■■□□□ 1.86
COL27A1-208ENST00000494780 TMTC3Q6ZXV5 915 aa26.68■■□□□ 1.86
COL27A1-208ENST00000494780 SGMS1Q86VZ5 419 aa26.68■■□□□ 1.86
COL27A1-208ENST00000494780 FANCBQ8NB91 859 aa26.68■■□□□ 1.86
COL27A1-208ENST00000494780 FBXO22Q8NEZ5 403 aa26.68■■□□□ 1.86
COL27A1-208ENST00000494780 TOP1MTQ969P6 601 aa26.68■■□□□ 1.86
COL27A1-208ENST00000494780 SAMD11Q96NU1 681 aa26.68■■□□□ 1.86
COL27A1-208ENST00000494780 C17orf80Q9BSJ5 609 aa26.68■■□□□ 1.86
COL27A1-208ENST00000494780 OSBPL7Q9BZF2 842 aa26.68■■□□□ 1.86
COL27A1-208ENST00000494780 UBIAD1Q9Y5Z9 338 aa26.68■■□□□ 1.86
COL27A1-208ENST00000494780 SPDYE3A6NKU9 549 aa26.67■■□□□ 1.86
COL27A1-208ENST00000494780 ITGB5P18084 799 aa26.67■■□□□ 1.86
COL27A1-208ENST00000494780 COL9A1P20849 921 aa26.67■■□□□ 1.86
COL27A1-208ENST00000494780 RPAINQ86UA6 219 aa26.67■■□□□ 1.86
COL27A1-208ENST00000494780 SEPT1Q8WYJ6 367 aa26.67■■□□□ 1.86
COL27A1-208ENST00000494780 ANO2Q9NQ90 1003 aa26.67■■□□□ 1.86
COL27A1-208ENST00000494780 MAFGO15525 162 aa26.66■■□□□ 1.86
COL27A1-208ENST00000494780 MTMR1Q13613 665 aa26.66■■□□□ 1.86
COL27A1-208ENST00000494780 UBE2SQ16763 222 aa26.66■■□□□ 1.86
COL27A1-208ENST00000494780 TAF2Q6P1X5 1199 aa26.66■■□□□ 1.86
COL27A1-208ENST00000494780 RAB11FIP4Q86YS3 637 aa26.66■■□□□ 1.86
COL27A1-208ENST00000494780 YME1L1Q96TA2 773 aa26.66■■□□□ 1.86
COL27A1-208ENST00000494780 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.65■■□□□ 1.86
COL27A1-208ENST00000494780 GSTTP1A0A1W2PQM5 241 aa26.65■■□□□ 1.86
COL27A1-208ENST00000494780 hCG_1642624A0A1W2PR95 340 aa26.65■■□□□ 1.86
COL27A1-208ENST00000494780 CCDC82Q8N4S0 544 aa26.65■■□□□ 1.86
COL27A1-208ENST00000494780 LRRC2Q9BYS8 371 aa26.65■■□□□ 1.86
COL27A1-208ENST00000494780 IFIH1Q9BYX4 1025 aaKnown RBP26.65■■□□□ 1.86
COL27A1-208ENST00000494780 JADE2Q9NQC1 790 aa26.65■■□□□ 1.86
COL27A1-208ENST00000494780 ERAP1Q9NZ08 941 aa26.65■■□□□ 1.86
COL27A1-208ENST00000494780 PCDHA6Q9UN73 950 aa26.65■■□□□ 1.86
COL27A1-208ENST00000494780 PCDHA8Q9Y5H6 950 aa26.65■■□□□ 1.86
COL27A1-208ENST00000494780 COL4A6Q14031 1691 aa26.64■■□□□ 1.86
COL27A1-208ENST00000494780 PPFIA1Q13136 1202 aa26.64■■□□□ 1.86
COL27A1-208ENST00000494780 SYNE3Q6ZMZ3 975 aa26.64■■□□□ 1.86
COL27A1-208ENST00000494780 HEATR3Q7Z4Q2 680 aa26.64■■□□□ 1.86
COL27A1-208ENST00000494780 MICU3Q86XE3 530 aa26.64■■□□□ 1.86
COL27A1-208ENST00000494780 EHMT1Q9H9B1 1298 aa26.64■■□□□ 1.86
COL27A1-208ENST00000494780 XIRP2A4UGR9 3374 aa26.63■■□□□ 1.85
COL27A1-208ENST00000494780 UPP2O95045 317 aa26.63■■□□□ 1.85
COL27A1-208ENST00000494780 CHRNA1P02708 482 aa26.63■■□□□ 1.85
COL27A1-208ENST00000494780 EPC2Q52LR7 807 aa26.63■■□□□ 1.85
COL27A1-208ENST00000494780 RNF20Q5VTR2 975 aa26.63■■□□□ 1.85
COL27A1-208ENST00000494780 RSPH3Q86UC2 560 aa26.63■■□□□ 1.85
COL27A1-208ENST00000494780 TEX2Q8IWB9 1127 aa26.63■■□□□ 1.85
COL27A1-208ENST00000494780 C1QTNF1Q9BXJ1 281 aa26.63■■□□□ 1.85
COL27A1-208ENST00000494780 SMARCAD1Q9H4L7 1026 aa26.63■■□□□ 1.85
COL27A1-208ENST00000494780 KAT6AQ92794 2004 aa26.63■■□□□ 1.85
COL27A1-208ENST00000494780 GRIK4Q16099 956 aa26.62■■□□□ 1.85
COL27A1-208ENST00000494780 PTPROQ16827 1216 aa26.62■■□□□ 1.85
COL27A1-208ENST00000494780 RUFY4Q6ZNE9 571 aa26.62■■□□□ 1.85
COL27A1-208ENST00000494780 GLG1Q92896 1179 aa26.62■■□□□ 1.85
COL27A1-208ENST00000494780 UBE2ZQ9H832 354 aaPredicted RBP26.62■■□□□ 1.85
COL27A1-208ENST00000494780 RBM28Q9NW13 759 aaKnown RBP26.62■■□□□ 1.85
COL27A1-208ENST00000494780 PKD2L1Q9P0L9 805 aa26.62■■□□□ 1.85
COL27A1-208ENST00000494780 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.61■■□□□ 1.85
COL27A1-208ENST00000494780 MBLAC1A4D2B0 266 aaPredicted RBP26.61■■□□□ 1.85
COL27A1-208ENST00000494780 MARK3P27448 753 aa26.61■■□□□ 1.85
COL27A1-208ENST00000494780 MGAT3Q09327 533 aa26.61■■□□□ 1.85
COL27A1-208ENST00000494780 BMP2KLQ5H9B9 411 aa26.61■■□□□ 1.85
COL27A1-208ENST00000494780 MRPL38Q96DV4 380 aaKnown RBP26.61■■□□□ 1.85
COL27A1-208ENST00000494780 TUBE1Q9UJT0 475 aa26.61■■□□□ 1.85
COL27A1-208ENST00000494780 BRWD1Q9NSI6 2320 aa26.6■■□□□ 1.85
COL27A1-208ENST00000494780 H3BNC9 293 aa26.6■■□□□ 1.85
COL27A1-208ENST00000494780 GHRP10912 638 aa26.6■■□□□ 1.85
COL27A1-208ENST00000494780 WWC2Q6AWC2 1192 aa26.6■■□□□ 1.85
COL27A1-208ENST00000494780 APOA5Q6Q788 366 aa26.6■■□□□ 1.85
COL27A1-208ENST00000494780 NEK1Q96PY6 1258 aa26.6■■□□□ 1.85
COL27A1-208ENST00000494780 JPH1Q9HDC5 661 aaPredicted RBP26.6■■□□□ 1.85
COL27A1-208ENST00000494780 CNTNAP5Q8WYK1 1306 aa26.6■■□□□ 1.85
COL27A1-208ENST00000494780 RPLP2P05387 115 aaKnown RBP26.59■■□□□ 1.85
COL27A1-208ENST00000494780 GPM6BQ13491 265 aa26.59■■□□□ 1.85
COL27A1-208ENST00000494780 MARCH8Q5T0T0 291 aa26.59■■□□□ 1.85
COL27A1-208ENST00000494780 PPP1R18Q6NYC8 613 aa26.59■■□□□ 1.85
COL27A1-208ENST00000494780 TMEM192Q8IY95 271 aa26.59■■□□□ 1.85
COL27A1-208ENST00000494780 MXRA8Q9BRK3 442 aa26.59■■□□□ 1.85
COL27A1-208ENST00000494780 RRN3P2A6NIE6 340 aa26.58■■□□□ 1.85
COL27A1-208ENST00000494780 NAPAP54920 295 aa26.58■■□□□ 1.85
COL27A1-208ENST00000494780 EXOSC10Q01780 885 aaKnown RBP26.58■■□□□ 1.85
COL27A1-208ENST00000494780 LPIN1Q14693 890 aa26.58■■□□□ 1.85
COL27A1-208ENST00000494780 TIGD5Q53EQ6 642 aa26.58■■□□□ 1.85
COL27A1-208ENST00000494780 IL17RAQ96F46 866 aa26.58■■□□□ 1.85
COL27A1-208ENST00000494780 RIC8AQ9NPQ8 531 aa26.58■■□□□ 1.85
COL27A1-208ENST00000494780 KCNH7Q9NS40 1196 aa26.58■■□□□ 1.85
COL27A1-208ENST00000494780 SLC9A2Q9UBY0 812 aa26.58■■□□□ 1.85
COL27A1-208ENST00000494780 hCG_1984214I3L0E3 225 aa26.57■■□□□ 1.84
COL27A1-208ENST00000494780 FOSP01100 380 aaPredicted RBP26.57■■□□□ 1.84
COL27A1-208ENST00000494780 LEXMQ3ZCV2 418 aa26.57■■□□□ 1.84
COL27A1-208ENST00000494780 DHX32Q7L7V1 743 aaKnown RBP26.57■■□□□ 1.84
COL27A1-208ENST00000494780 ZNF713Q8N859 430 aaPredicted RBP26.57■■□□□ 1.84
COL27A1-208ENST00000494780 DNAJB3Q8WWF6 145 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms