RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 STK38Q15208 465 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 DGKDQ16760 1214 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 SMAP1Q8IYB5 467 aaPredicted RBP16.41■□□□□ 0.22
BRCA1-223ENST00000494123 C4orf32Q8N8J7 132 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 SEPT1Q8WYJ6 367 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 UNC45AQ9H3U1 944 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 WDR64B1ANS9 1081 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 CTAGE5O15320 804 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 PPFIA4O75335 1185 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 CCNE2O96020 404 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 SFNP31947 248 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 TCF7P36402 384 aaPredicted RBP16.41■□□□□ 0.22
BRCA1-223ENST00000494123 PRPHP41219 470 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 KRT85P78386 507 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 PPP2R5CQ13362 524 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 KCNA10Q16322 511 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 ARL6IP4Q66PJ3 421 aaKnown RBP16.41■□□□□ 0.22
BRCA1-223ENST00000494123 NCAPH2Q6IBW4 605 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 MIS18BP1Q6P0N0 1132 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 DTHD1Q6ZMT9 781 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 MIER3Q7Z3K6 550 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 KLHDC9Q8NEP7 349 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 RAB34Q9BZG1 259 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 VAV3Q9UKW4 847 aa16.41■□□□□ 0.22
BRCA1-223ENST00000494123 CCDC85CA6NKD9 419 aa16.4■□□□□ 0.22
BRCA1-223ENST00000494123 DNM1LO00429 736 aa16.4■□□□□ 0.22
BRCA1-223ENST00000494123 KPNA6O60684 536 aa16.4■□□□□ 0.22
BRCA1-223ENST00000494123 PSAPP07602 524 aa16.4■□□□□ 0.22
BRCA1-223ENST00000494123 TECP42680 631 aa16.4■□□□□ 0.22
BRCA1-223ENST00000494123 NASPP49321 788 aaPredicted RBP16.4■□□□□ 0.22
BRCA1-223ENST00000494123 UTP14CQ5TAP6 766 aaKnown RBP16.4■□□□□ 0.22
BRCA1-223ENST00000494123 TSEN34Q9BSV6 310 aaKnown RBP16.4■□□□□ 0.22
BRCA1-223ENST00000494123 DISC1Q9NRI5 854 aa16.4■□□□□ 0.22
BRCA1-223ENST00000494123 TELO2Q9Y4R8 837 aa16.4■□□□□ 0.22
BRCA1-223ENST00000494123 PCDHA10Q9Y5I2 948 aa16.4■□□□□ 0.22
BRCA1-223ENST00000494123 KIAA0100Q14667 2235 aaKnown RBP16.4■□□□□ 0.22
BRCA1-223ENST00000494123 GSTTP1A0A1W2PQM5 241 aa16.39■□□□□ 0.21
BRCA1-223ENST00000494123 MOXD2PA6NHM9 499 aa16.39■□□□□ 0.21
BRCA1-223ENST00000494123 BACH1O14867 736 aa16.39■□□□□ 0.21
BRCA1-223ENST00000494123 ASGR1P07306 291 aa16.39■□□□□ 0.21
BRCA1-223ENST00000494123 SLC39A14Q15043 492 aa16.39■□□□□ 0.21
BRCA1-223ENST00000494123 PTPAQ15257 358 aa16.39■□□□□ 0.21
BRCA1-223ENST00000494123 ANKLE1Q8NAG6 615 aa16.39■□□□□ 0.21
BRCA1-223ENST00000494123 RDM1Q8NG50 284 aa16.39■□□□□ 0.21
BRCA1-223ENST00000494123 AZI2Q9H6S1 392 aa16.39■□□□□ 0.21
BRCA1-223ENST00000494123 VWA3AA6NCI4 1184 aa16.38■□□□□ 0.21
BRCA1-223ENST00000494123 POTEMA6NI47 508 aa16.38■□□□□ 0.21
BRCA1-223ENST00000494123 YEATS4O95619 227 aa16.38■□□□□ 0.21
BRCA1-223ENST00000494123 SUPT20HL2P0C7V6 817 aa16.38■□□□□ 0.21
BRCA1-223ENST00000494123 ZNF286BP0CG31 522 aa16.38■□□□□ 0.21
BRCA1-223ENST00000494123 MARCKSP29966 332 aaPredicted RBP16.38■□□□□ 0.21
BRCA1-223ENST00000494123 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
BRCA1-223ENST00000494123 ACLYP53396 1101 aa16.38■□□□□ 0.21
BRCA1-223ENST00000494123 FAM160B1Q5W0V3 765 aa16.38■□□□□ 0.21
BRCA1-223ENST00000494123 CXCL17Q6UXB2 119 aa16.38■□□□□ 0.21
BRCA1-223ENST00000494123 ABHD15Q6UXT9 468 aa16.38■□□□□ 0.21
BRCA1-223ENST00000494123 GLG1Q92896 1179 aa16.38■□□□□ 0.21
BRCA1-223ENST00000494123 ZNF215Q9UL58 517 aaPredicted RBP16.38■□□□□ 0.21
BRCA1-223ENST00000494123 SPTLC2O15270 562 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 ATG7O95352 703 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 LGALS2P05162 132 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 HOXD8P13378 290 aaPredicted RBP16.37■□□□□ 0.21
BRCA1-223ENST00000494123 CHMP4BP1P59074 171 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 PURAQ00577 322 aaKnown RBP16.37■□□□□ 0.21
BRCA1-223ENST00000494123 SPIRE1Q08AE8 756 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 CCSAPQ6IQ19 270 aaPredicted RBP16.37■□□□□ 0.21
BRCA1-223ENST00000494123 B3GNT9Q6UX72 402 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 LINC00301Q8NCQ3 95 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 ERMNQ8TAM6 284 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 FERMT2Q96AC1 680 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 VTI1AQ96AJ9 217 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 MTG1Q9BT17 334 aaPredicted RBP16.37■□□□□ 0.21
BRCA1-223ENST00000494123 ZNF302Q9NR11 478 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 LRWD1Q9UFC0 647 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 EMSYQ7Z589 1322 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 EML1O00423 815 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 CABYRO75952 493 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 EN2P19622 333 aaPredicted RBP16.37■□□□□ 0.21
BRCA1-223ENST00000494123 PDIA5Q14554 519 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 SWSAP1Q6NVH7 229 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 KCNG4Q8TDN1 519 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 CHAMP1Q96JM3 812 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 SPATA32Q96LK8 384 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 GLT1D1Q96MS3 346 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 KATNAL1Q9BW62 490 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 SMARCAD1Q9H4L7 1026 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 GABBR1Q9UBS5 961 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 PHF24Q9UPV7 400 aa16.37■□□□□ 0.21
BRCA1-223ENST00000494123 TCHHQ07283 1943 aa16.36■□□□□ 0.21
BRCA1-223ENST00000494123 LGR5O75473 907 aa16.36■□□□□ 0.21
BRCA1-223ENST00000494123 STAT5BP51692 787 aa16.36■□□□□ 0.21
BRCA1-223ENST00000494123 SOX10P56693 466 aa16.36■□□□□ 0.21
BRCA1-223ENST00000494123 EPHA7Q15375 998 aa16.36■□□□□ 0.21
BRCA1-223ENST00000494123 IL17AQ16552 155 aa16.36■□□□□ 0.21
BRCA1-223ENST00000494123 TRIM50Q86XT4 487 aa16.36■□□□□ 0.21
BRCA1-223ENST00000494123 CCDC60Q8IWA6 550 aaPredicted RBP16.36■□□□□ 0.21
BRCA1-223ENST00000494123 IGSF22Q8N9C0 903 aa16.36■□□□□ 0.21
BRCA1-223ENST00000494123 KRI1Q8N9T8 703 aaKnown RBP16.36■□□□□ 0.21
BRCA1-223ENST00000494123 SCAND2PQ9GZW5 306 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms