RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 ZNF200P98182 395 aaPredicted RBP5.45□□□□□ -1.54
CLK1-213ENST00000492793 DSG1Q02413 1049 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 STAT4Q14765 748 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 SLC9A5Q14940 896 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 ATP13A4Q4VNC1 1196 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 IQSEC1Q6DN90 963 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 CYP4F22Q6NT55 531 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 HHIPL2Q6UWX4 724 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 HDGFL2Q7Z4V5 671 aaPredicted RBP5.45□□□□□ -1.54
CLK1-213ENST00000492793 IRF2BP1Q8IU81 584 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 CLEC4DQ8WXI8 215 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 NSUN3Q9H649 340 aaKnown RBP5.45□□□□□ -1.54
CLK1-213ENST00000492793 TOMM22Q9NS69 142 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 SPTLC3Q9NUV7 552 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 OXSMQ9NWU1 459 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 SIRT5Q9NXA8 310 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 H2AFY2Q9P0M6 372 aaPredicted RBP5.45□□□□□ -1.54
CLK1-213ENST00000492793 ZEB2O60315 1214 aa5.44□□□□□ -1.54
CLK1-213ENST00000492793 RAB11FIP3O75154 756 aa5.44□□□□□ -1.54
CLK1-213ENST00000492793 JUNBP17275 347 aaPredicted RBP5.44□□□□□ -1.54
CLK1-213ENST00000492793 PTPN1P18031 435 aaKnown RBP5.44□□□□□ -1.54
CLK1-213ENST00000492793 GUCY2FP51841 1108 aa5.44□□□□□ -1.54
CLK1-213ENST00000492793 SRSF3P84103 164 aaKnown RBP5.44□□□□□ -1.54
CLK1-213ENST00000492793 MLANAQ16655 118 aa5.44□□□□□ -1.54
CLK1-213ENST00000492793 HABP4Q5JVS0 413 aaKnown RBP5.44□□□□□ -1.54
CLK1-213ENST00000492793 RNF219Q5W0B1 726 aaPredicted RBP5.44□□□□□ -1.54
CLK1-213ENST00000492793 FSTL4Q6MZW2 842 aa5.44□□□□□ -1.54
CLK1-213ENST00000492793 FERMT3Q86UX7 667 aa5.44□□□□□ -1.54
CLK1-213ENST00000492793 KIAA1958Q8N8K9 716 aa5.44□□□□□ -1.54
CLK1-213ENST00000492793 ERCC4Q92889 916 aaPredicted RBP5.44□□□□□ -1.54
CLK1-213ENST00000492793 TSPAN17Q96FV3 270 aa5.44□□□□□ -1.54
CLK1-213ENST00000492793 ORAI3Q9BRQ5 295 aa5.44□□□□□ -1.54
CLK1-213ENST00000492793 EPB41L4BQ9H329 900 aa5.44□□□□□ -1.54
CLK1-213ENST00000492793 DCP1AQ9NPI6 582 aaPredicted RBP5.44□□□□□ -1.54
CLK1-213ENST00000492793 APOBEC2Q9Y235 224 aaKnown RBP5.44□□□□□ -1.54
CLK1-213ENST00000492793 LRRC10BA6NIK2 292 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 BUB1BO60566 1050 aaPredicted RBP5.43□□□□□ -1.54
CLK1-213ENST00000492793 CLASP2O75122 1294 aaKnown RBP5.43□□□□□ -1.54
CLK1-213ENST00000492793 POU3F3P20264 500 aaPredicted RBP5.43□□□□□ -1.54
CLK1-213ENST00000492793 VIPR1P32241 457 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 GJA4P35212 333 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 STAT5AP42229 794 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 LSSP48449 732 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 CD300LDQ6UXZ3 194 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 ETV3LQ6ZN32 361 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 PRR23BQ6ZRT6 265 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 LHFPL2Q6ZUX7 228 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 OTOP1Q7RTM1 612 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 NOSTRINQ8IVI9 506 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 CEP89Q96ST8 783 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 EMC7Q9NPA0 242 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 KCNH7Q9NS40 1196 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 SLC5A4Q9NY91 659 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 FAN1Q9Y2M0 1017 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 TELO2Q9Y4R8 837 aa5.43□□□□□ -1.54
CLK1-213ENST00000492793 ZNF503-AS2A6NEH8 195 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 FAM90A27PA6NNH2 459 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 ALG1L2C9J202 215 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 GPR39O43194 453 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 EYA4O95677 639 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 ZBTB48P10074 688 aaPredicted RBP5.42□□□□□ -1.54
CLK1-213ENST00000492793 BPIP17213 487 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 TAL1P17542 331 aaPredicted RBP5.42□□□□□ -1.54
CLK1-213ENST00000492793 PMLP29590 882 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 NCKAP1LP55160 1127 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 ITKQ08881 620 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 DDB1Q16531 1140 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 PAN2Q504Q3 1202 aaKnown RBP5.42□□□□□ -1.54
CLK1-213ENST00000492793 ZC3H18Q86VM9 953 aaKnown RBP5.42□□□□□ -1.54
CLK1-213ENST00000492793 AMIGO3Q86WK7 504 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 SPATS2Q86XZ4 545 aaKnown RBP5.42□□□□□ -1.54
CLK1-213ENST00000492793 EFHBQ8N7U6 833 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 HIPK4Q8NE63 616 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 MTMR8Q96EF0 704 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 TOE1Q96GM8 510 aaKnown RBP5.42□□□□□ -1.54
CLK1-213ENST00000492793 ZNF552Q9H707 407 aaPredicted RBP5.42□□□□□ -1.54
CLK1-213ENST00000492793 KCNK12Q9HB15 430 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 ACSS2Q9NR19 701 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 DDX56Q9NY93 547 aaKnown RBP5.42□□□□□ -1.54
CLK1-213ENST00000492793 FAM53CQ9NYF3 392 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 DTLQ9NZJ0 730 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 ARHGAP28Q9P2N2 729 aa5.42□□□□□ -1.54
CLK1-213ENST00000492793 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.41□□□□□ -1.54
CLK1-213ENST00000492793 FOXP2O15409 715 aa5.41□□□□□ -1.54
CLK1-213ENST00000492793 ULK1O75385 1050 aa5.41□□□□□ -1.54
CLK1-213ENST00000492793 KATNA1O75449 491 aa5.41□□□□□ -1.54
CLK1-213ENST00000492793 EPHA5P54756 1037 aa5.41□□□□□ -1.54
CLK1-213ENST00000492793 YBX1P67809 324 aaKnown RBP5.41□□□□□ -1.54
CLK1-213ENST00000492793 NKX3-2P78367 333 aa5.41□□□□□ -1.54
CLK1-213ENST00000492793 FAM126BQ8IXS8 530 aa5.41□□□□□ -1.54
CLK1-213ENST00000492793 RPUSD2Q8IZ73 545 aaKnown RBP5.41□□□□□ -1.54
CLK1-213ENST00000492793 COG1Q8WTW3 980 aa5.41□□□□□ -1.54
CLK1-213ENST00000492793 SCYL1Q96KG9 808 aa5.41□□□□□ -1.54
CLK1-213ENST00000492793 ELF4Q99607 663 aaPredicted RBP5.41□□□□□ -1.54
CLK1-213ENST00000492793 SMAD5Q99717 465 aaKnown RBP5.41□□□□□ -1.54
CLK1-213ENST00000492793 PLA2G2DQ9UNK4 145 aa5.41□□□□□ -1.54
CLK1-213ENST00000492793 SPO11Q9Y5K1 396 aa5.41□□□□□ -1.54
CLK1-213ENST00000492793 B3GALT1Q9Y5Z6 326 aa5.41□□□□□ -1.54
CLK1-213ENST00000492793 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.4□□□□□ -1.54
CLK1-213ENST00000492793 DVL2O14641 736 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms