RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 FRMD3A2A2Y4 597 aa28.83■■■□□ 2.2
HLA-C-208ENST00000487245 PIK3CDO00329 1044 aa28.83■■■□□ 2.2
HLA-C-208ENST00000487245 TRAF5O00463 557 aa28.83■■■□□ 2.2
HLA-C-208ENST00000487245 MED24O75448 989 aa28.83■■■□□ 2.2
HLA-C-208ENST00000487245 PLEKP08567 350 aaPredicted RBP28.83■■■□□ 2.2
HLA-C-208ENST00000487245 RPA1P27694 616 aa28.83■■■□□ 2.2
HLA-C-208ENST00000487245 AARSP49588 968 aaKnown RBP eCLIP28.83■■■□□ 2.2
HLA-C-208ENST00000487245 MARSP56192 900 aaKnown RBP28.83■■■□□ 2.2
HLA-C-208ENST00000487245 ASTE1Q2TB18 679 aaPredicted RBP28.83■■■□□ 2.2
HLA-C-208ENST00000487245 MUM1L1Q5H9M0 696 aa28.83■■■□□ 2.2
HLA-C-208ENST00000487245 PPP4R3CPQ6ZMV5 832 aa28.83■■■□□ 2.2
HLA-C-208ENST00000487245 FAM207AQ9NSI2 230 aaPredicted RBP28.83■■■□□ 2.2
HLA-C-208ENST00000487245 TNS1Q9HBL0 1735 aaKnown RBP28.82■■■□□ 2.2
HLA-C-208ENST00000487245 YDJCA8MPS7 323 aa28.82■■■□□ 2.2
HLA-C-208ENST00000487245 SLC12A3P55017 1021 aa28.82■■■□□ 2.2
HLA-C-208ENST00000487245 SPIRE1Q08AE8 756 aa28.82■■■□□ 2.2
HLA-C-208ENST00000487245 SLC15A2Q16348 729 aa28.82■■■□□ 2.2
HLA-C-208ENST00000487245 USH1GQ495M9 461 aa28.82■■■□□ 2.2
HLA-C-208ENST00000487245 HERC4Q5GLZ8 1057 aaPredicted RBP28.82■■■□□ 2.2
HLA-C-208ENST00000487245 MMGT1Q8N4V1 131 aa28.82■■■□□ 2.2
HLA-C-208ENST00000487245 NEK11Q8NG66 645 aa28.82■■■□□ 2.2
HLA-C-208ENST00000487245 DNM3Q9UQ16 869 aa28.82■■■□□ 2.2
HLA-C-208ENST00000487245 MACROD2A1Z1Q3 448 aa28.81■■■□□ 2.2
HLA-C-208ENST00000487245 LRRC53A6NM62 1247 aa28.81■■■□□ 2.2
HLA-C-208ENST00000487245 KRT18P05783 430 aaKnown RBP28.81■■■□□ 2.2
HLA-C-208ENST00000487245 KRT26Q7Z3Y9 468 aa28.81■■■□□ 2.2
HLA-C-208ENST00000487245 ZC3H3Q8IXZ2 948 aaKnown RBP28.81■■■□□ 2.2
HLA-C-208ENST00000487245 HDAC9Q9UKV0 1011 aa28.81■■■□□ 2.2
HLA-C-208ENST00000487245 PSME4Q14997 1843 aa28.81■■■□□ 2.2
HLA-C-208ENST00000487245 LRRIQ3A6PVS8 624 aaPredicted RBP28.8■■■□□ 2.2
HLA-C-208ENST00000487245 PDE2AO00408 941 aaPredicted RBP28.8■■■□□ 2.2
HLA-C-208ENST00000487245 JAG1P78504 1218 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 CCDC40Q4G0X9 1142 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 RSBN1LQ6PCB5 846 aaPredicted RBP28.8■■■□□ 2.2
HLA-C-208ENST00000487245 FAM151AQ8WW52 585 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 P2RX7Q99572 595 aaKnown RBP28.8■■■□□ 2.2
HLA-C-208ENST00000487245 PRR12Q9ULL5 1215 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 EP400Q96L91 3159 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 RBAK-RBAKDNI3L0D1 243 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 STAT3P40763 770 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 SNAP25P60880 206 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 KCNMA1Q12791 1236 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 RRAGAQ7L523 313 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 GLIS3Q8NEA6 775 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 CAGE1Q8TC20 777 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 LENG9Q96B70 501 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 CAPZA3Q96KX2 299 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 GOPCQ9HD26 462 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 EMILIN3Q9NT22 766 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 STK32BQ9NY57 414 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 CEP72Q9P209 647 aa28.8■■■□□ 2.2
HLA-C-208ENST00000487245 RGS17Q9UGC6 210 aaPredicted RBP28.8■■■□□ 2.2
HLA-C-208ENST00000487245 SPDYE2BA6NHP3 402 aa28.79■■■□□ 2.2
HLA-C-208ENST00000487245 AKR1B10O60218 316 aa28.79■■■□□ 2.2
HLA-C-208ENST00000487245 SPDYE6P0CI01 402 aa28.79■■■□□ 2.2
HLA-C-208ENST00000487245 CATSPER3Q86XQ3 398 aa28.79■■■□□ 2.2
HLA-C-208ENST00000487245 CREG2Q8IUH2 290 aa28.79■■■□□ 2.2
HLA-C-208ENST00000487245 SYT2Q8N9I0 419 aaPredicted RBP28.79■■■□□ 2.2
HLA-C-208ENST00000487245 DEF6Q9H4E7 631 aa28.79■■■□□ 2.2
HLA-C-208ENST00000487245 A0A1W2PRG0 241 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 STAT2P52630 851 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 RRP1BQ14684 758 aaKnown RBP28.78■■■□□ 2.2
HLA-C-208ENST00000487245 EDRF1Q3B7T1 1238 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 HSP90B2PQ58FF3 399 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 RTKN2Q8IZC4 609 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 CCDC155Q8N6L0 562 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 ALS2CR12Q96Q35 445 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 JADE2Q9NQC1 790 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 VPS18Q9P253 973 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 FAM184BQ9ULE4 1060 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 TMX2Q9Y320 296 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 TCP1P17987 556 aaKnown RBP28.78■■■□□ 2.2
HLA-C-208ENST00000487245 HNRNPH2P55795 449 aaKnown RBP28.78■■■□□ 2.2
HLA-C-208ENST00000487245 ARSHQ5FYA8 562 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 RNF10Q8N5U6 811 aaKnown RBP28.78■■■□□ 2.2
HLA-C-208ENST00000487245 POLR3CQ9BUI4 534 aaPredicted RBP28.78■■■□□ 2.2
HLA-C-208ENST00000487245 TANGO6Q9C0B7 1094 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 CAPN6Q9Y6Q1 641 aa28.78■■■□□ 2.2
HLA-C-208ENST00000487245 ZNF76P36508 570 aa28.77■■■□□ 2.2
HLA-C-208ENST00000487245 MAGEA1P43355 309 aa28.77■■■□□ 2.2
HLA-C-208ENST00000487245 DLGAP5Q15398 846 aa28.77■■■□□ 2.2
HLA-C-208ENST00000487245 HGSNATQ68CP4 663 aa28.77■■■□□ 2.2
HLA-C-208ENST00000487245 CCDC70Q6NSX1 233 aa28.77■■■□□ 2.2
HLA-C-208ENST00000487245 KCTD10Q9H3F6 313 aa28.77■■■□□ 2.2
HLA-C-208ENST00000487245 POTEFA5A3E0 1075 aa28.76■■■□□ 2.2
HLA-C-208ENST00000487245 FAM86B1E9PN63 330 aa28.76■■■□□ 2.2
HLA-C-208ENST00000487245 ZNF185O15231 689 aa28.76■■■□□ 2.2
HLA-C-208ENST00000487245 C21orf2O43822 256 aa28.76■■■□□ 2.2
HLA-C-208ENST00000487245 FAM86B2P0C5J1 330 aa28.76■■■□□ 2.2
HLA-C-208ENST00000487245 POTEIP0CG38 1075 aa28.76■■■□□ 2.2
HLA-C-208ENST00000487245 POTEGQ6S5H5 508 aa28.76■■■□□ 2.2
HLA-C-208ENST00000487245 POTEEQ6S8J3 1075 aa28.76■■■□□ 2.2
HLA-C-208ENST00000487245 CCNI2Q6ZMN8 369 aaPredicted RBP28.76■■■□□ 2.2
HLA-C-208ENST00000487245 CHURC1Q8WUH1 139 aa28.76■■■□□ 2.2
HLA-C-208ENST00000487245 SCFD1Q8WVM8 642 aa28.76■■■□□ 2.2
HLA-C-208ENST00000487245 ZNF70Q9UC06 446 aaPredicted RBP28.76■■■□□ 2.2
HLA-C-208ENST00000487245 HYOU1Q9Y4L1 999 aa28.76■■■□□ 2.2
HLA-C-208ENST00000487245 TCP10L2B9ZVM9 353 aa28.76■■■□□ 2.19
HLA-C-208ENST00000487245 OPLAHO14841 1288 aa28.76■■■□□ 2.19
HLA-C-208ENST00000487245 N4BP1O75113 896 aaKnown RBP28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms