RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 SETD4Q9NVD3 440 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 TELO2Q9Y4R8 837 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 MRVI1Q9Y6F6 885 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 R4GN57 208 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 FANCMQ8IYD8 2048 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 FNDC1Q4ZHG4 1894 aaPredicted RBP17.88■□□□□ 0.45
U2AF1-211ENST00000486519 OTOGLQ3ZCN5 2332 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 PATL2C9JE40 543 aaKnown RBP17.88■□□□□ 0.45
U2AF1-211ENST00000486519 FOXP2O15409 715 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 NPR3P17342 541 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 ERVFC1P60507 584 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 LPIN1Q14693 890 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 STXBP2Q15833 593 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 DUSP6Q16828 381 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 HSP90AB4PQ58FF6 505 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 CRIPAKQ8N1N5 446 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 FLCNQ8NFG4 579 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 KCNG4Q8TDN1 519 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 SPATA33Q96N06 139 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 HCSTQ9UBK5 93 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 WDR19Q8NEZ3 1342 aa17.88■□□□□ 0.45
U2AF1-211ENST00000486519 PPFIA4O75335 1185 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 TECP42680 631 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 CELF3Q5SZQ8 465 aaKnown RBP17.87■□□□□ 0.45
U2AF1-211ENST00000486519 ANKRD54Q6NXT1 300 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 RTN4RL1Q86UN2 441 aaPredicted RBP17.87■□□□□ 0.45
U2AF1-211ENST00000486519 UBALD2Q8IYN6 164 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 FEZF2Q8TBJ5 459 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 NEK1Q96PY6 1258 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 RMDN3Q96TC7 470 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 TMEM47Q9BQJ4 181 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 POMKQ9H5K3 350 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 EHMT1Q9H9B1 1298 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 KAT6AQ92794 2004 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 CHD6Q8TD26 2715 aa17.87■□□□□ 0.45
U2AF1-211ENST00000486519 B4DLN1 442 aa17.86■□□□□ 0.45
U2AF1-211ENST00000486519 GGPS1O95749 300 aa17.86■□□□□ 0.45
U2AF1-211ENST00000486519 PDHBP11177 359 aa17.86■□□□□ 0.45
U2AF1-211ENST00000486519 CLCN5P51795 746 aa17.86■□□□□ 0.45
U2AF1-211ENST00000486519 MRPL12P52815 198 aaKnown RBP17.86■□□□□ 0.45
U2AF1-211ENST00000486519 MGAT3Q09327 533 aa17.86■□□□□ 0.45
U2AF1-211ENST00000486519 TSHZ3Q63HK5 1081 aa17.86■□□□□ 0.45
U2AF1-211ENST00000486519 LLGL2Q6P1M3 1020 aa17.86■□□□□ 0.45
U2AF1-211ENST00000486519 RUFY4Q6ZNE9 571 aa17.86■□□□□ 0.45
U2AF1-211ENST00000486519 CCDC105Q8IYK2 499 aa17.86■□□□□ 0.45
U2AF1-211ENST00000486519 NSUN6Q8TEA1 469 aaKnown RBP17.86■□□□□ 0.45
U2AF1-211ENST00000486519 USP24Q9UPU5 2620 aa17.85■□□□□ 0.45
U2AF1-211ENST00000486519 H3BRB1 525 aa17.85■□□□□ 0.45
U2AF1-211ENST00000486519 RNF113AO15541 343 aaKnown RBP17.85■□□□□ 0.45
U2AF1-211ENST00000486519 SMARCA5O60264 1052 aaPredicted RBP17.85■□□□□ 0.45
U2AF1-211ENST00000486519 CAND2O75155 1236 aa17.85■□□□□ 0.45
U2AF1-211ENST00000486519 LMNAP02545 664 aaKnown RBP17.85■□□□□ 0.45
U2AF1-211ENST00000486519 LGALS2P05162 132 aa17.85■□□□□ 0.45
U2AF1-211ENST00000486519 ADAM17P78536 824 aa17.85■□□□□ 0.45
U2AF1-211ENST00000486519 ST3GAL2Q16842 350 aa17.85■□□□□ 0.45
U2AF1-211ENST00000486519 RSPO4Q2I0M5 234 aaPredicted RBP17.85■□□□□ 0.45
U2AF1-211ENST00000486519 TRIM50Q86XT4 487 aa17.85■□□□□ 0.45
U2AF1-211ENST00000486519 CMTR2Q8IYT2 770 aaKnown RBP17.85■□□□□ 0.45
U2AF1-211ENST00000486519 KBTBD3Q8NAB2 608 aa17.85■□□□□ 0.45
U2AF1-211ENST00000486519 RGS22Q8NE09 1264 aa17.85■□□□□ 0.45
U2AF1-211ENST00000486519 MFSD1Q9H3U5 465 aa17.85■□□□□ 0.45
U2AF1-211ENST00000486519 TUT1Q9H6E5 874 aaKnown RBP17.85■□□□□ 0.45
U2AF1-211ENST00000486519 ZNF316A6NFI3 1004 aaPredicted RBP17.84■□□□□ 0.45
U2AF1-211ENST00000486519 RANBP6O60518 1105 aaKnown RBP17.84■□□□□ 0.45
U2AF1-211ENST00000486519 NR3C2P08235 984 aa17.84■□□□□ 0.45
U2AF1-211ENST00000486519 WEE2P0C1S8 567 aa17.84■□□□□ 0.45
U2AF1-211ENST00000486519 UBA1P22314 1058 aaKnown RBP17.84■□□□□ 0.45
U2AF1-211ENST00000486519 ZNF543Q08ER8 600 aa17.84■□□□□ 0.45
U2AF1-211ENST00000486519 APOBRQ0VD83 1088 aa17.84■□□□□ 0.45
U2AF1-211ENST00000486519 COL9A2Q14055 689 aaPredicted RBP17.84■□□□□ 0.45
U2AF1-211ENST00000486519 NAALADL2Q58DX5 795 aa17.84■□□□□ 0.45
U2AF1-211ENST00000486519 FTSJ3Q8IY81 847 aaKnown RBP17.84■□□□□ 0.45
U2AF1-211ENST00000486519 IL31RAQ8NI17 732 aa17.84■□□□□ 0.45
U2AF1-211ENST00000486519 MICAL1Q8TDZ2 1067 aa17.84■□□□□ 0.45
U2AF1-211ENST00000486519 IWS1Q96ST2 819 aa17.84■□□□□ 0.45
U2AF1-211ENST00000486519 AGO3Q9H9G7 860 aaKnown RBP17.84■□□□□ 0.45
U2AF1-211ENST00000486519 PXMP2Q9NR77 195 aa17.84■□□□□ 0.45
U2AF1-211ENST00000486519 EIF3JO75822 258 aaKnown RBP17.83■□□□□ 0.44
U2AF1-211ENST00000486519 GOLGA8HP0CJ92 632 aa17.83■□□□□ 0.44
U2AF1-211ENST00000486519 GNAT2P19087 354 aa17.83■□□□□ 0.44
U2AF1-211ENST00000486519 ARHGEF16Q5VV41 709 aa17.83■□□□□ 0.44
U2AF1-211ENST00000486519 DTWD2Q8NBA8 298 aa17.83■□□□□ 0.44
U2AF1-211ENST00000486519 CYP2W1Q8TAV3 490 aa17.83■□□□□ 0.44
U2AF1-211ENST00000486519 LMBR1Q8WVP7 490 aa17.83■□□□□ 0.44
U2AF1-211ENST00000486519 UBA5Q9GZZ9 404 aa17.83■□□□□ 0.44
U2AF1-211ENST00000486519 NAPBQ9H115 298 aa17.83■□□□□ 0.44
U2AF1-211ENST00000486519 DENND4AQ7Z401 1863 aa17.83■□□□□ 0.44
U2AF1-211ENST00000486519 FSCN2O14926 492 aa17.82■□□□□ 0.44
U2AF1-211ENST00000486519 AOC1P19801 751 aa17.82■□□□□ 0.44
U2AF1-211ENST00000486519 TMEM184AQ6ZMB5 413 aa17.82■□□□□ 0.44
U2AF1-211ENST00000486519 RIN2Q8WYP3 895 aaPredicted RBP17.82■□□□□ 0.44
U2AF1-211ENST00000486519 LIMD1Q9UGP4 676 aa17.82■□□□□ 0.44
U2AF1-211ENST00000486519 OPLAHO14841 1288 aa17.81■□□□□ 0.44
U2AF1-211ENST00000486519 TOP1P11387 765 aaKnown RBP17.81■□□□□ 0.44
U2AF1-211ENST00000486519 MYCLP12524 364 aaPredicted RBP17.81■□□□□ 0.44
U2AF1-211ENST00000486519 ARHGAP4P98171 946 aa17.81■□□□□ 0.44
U2AF1-211ENST00000486519 FBXO47Q5MNV8 452 aa17.81■□□□□ 0.44
U2AF1-211ENST00000486519 PLPP4Q5VZY2 271 aa17.81■□□□□ 0.44
U2AF1-211ENST00000486519 KANK3Q6NY19 840 aa17.81■□□□□ 0.44
U2AF1-211ENST00000486519 PANK1Q8TE04 598 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms