RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, human

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP50-215	ENST00000484186	TYW1B	Q6NUM6	668 aa		10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	PPP1R18	Q6NYC8	613 aa		10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	MICALL1	Q8N3F8	863 aa		10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	ZNF713	Q8N859	430 aa	Predicted RBP	10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	ARNTL2	Q8WYA1	636 aa		10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	CCDC136	Q96JN2	1154 aa		10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	RAD9A	Q99638	391 aa		10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	MXRA8	Q9BRK3	442 aa		10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	THEG	Q9P2T0	379 aa		10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	MTCH2	Q9Y6C9	303 aa		10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	UNC80	Q8N2C7	3258 aa		10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	NRCAM	Q92823	1304 aa		10.8	□□□□□ -0.68
NUP50-215	ENST00000484186	LCHN	A4D1U4	455 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	SMCO2	A6NFE2	343 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	STXBP3	O00186	592 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	HSPA4	P34932	840 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	ADD1	P35611	737 aa	Known RBP	10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	ADCY7	P51828	1080 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	MRPS5	P82675	430 aa	Known RBP	10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	FGD1	P98174	961 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	FAM26D	Q5JW98	314 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
NUP50-215	ENST00000484186		Q6ZUG5	572 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	LMBR1	Q8WVP7	490 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	GLT8D2	Q9H1C3	349 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	SMARCAD1	Q9H4L7	1026 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	KCNH7	Q9NS40	1196 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	BARHL2	Q9NY43	387 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	ERAP1	Q9NZ08	941 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	PKD2L1	Q9P0L9	805 aa		10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.79	□□□□□ -0.68
NUP50-215	ENST00000484186	DOCK5	Q9H7D0	1870 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	EYS	Q5T1H1	3165 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	CHD9	Q3L8U1	2897 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	CCDC196	A0A1B0GTZ2	297 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	RBAK-RBAKDN	I3L0D1	243 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	AMH	P03971	560 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	CTSH	P09668	335 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	CPA1	P15085	419 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	CLK2	P49760	499 aa	Known RBP	10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	METAP2	P50579	478 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	APOBR	Q0VD83	1088 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	AP3B2	Q13367	1082 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	MKRN4P	Q13434	485 aa	Predicted RBP	10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	FAM117B	Q6P1L5	589 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	SPRED2	Q7Z698	418 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	RPAIN	Q86UA6	219 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	CYP2W1	Q8TAV3	490 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	SEPT8	Q92599	483 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	GLG1	Q92896	1179 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	PGBD1	Q96JS3	809 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	JAKMIP1	Q96N16	626 aa	Known RBP	10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	ASB2	Q96Q27	587 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	ANO3	Q9BYT9	981 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	OSBPL7	Q9BZF2	842 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	SLC9A2	Q9UBY0	812 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	INSL6	Q9Y581	213 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	SNX14	Q9Y5W7	946 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	NFASC	O94856	1347 aa		10.78	□□□□□ -0.68
NUP50-215	ENST00000484186	CUL9	Q8IWT3	2517 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	MEIS1	O00470	390 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	AR	P10275	920 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	MARK3	P27448	753 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	ERVK-21	P61565	698 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	PPFIA1	Q13136	1202 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	GRB10	Q13322	594 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	GRIK4	Q16099	956 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	PFKFB3	Q16875	520 aa	Predicted RBP	10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	CEP55	Q53EZ4	464 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	TAF2	Q6P1X5	1199 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	BLOC1S2	Q6QNY1	142 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	MYOCD	Q8IZQ8	938 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	FBXL16	Q8N461	479 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	APBB2	Q92870	758 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	BRF1	Q92994	677 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	TOP1MT	Q969P6	601 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	TGS1	Q96RS0	853 aa	Known RBP	10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	PCYT2	Q99447	389 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	SDF4	Q9BRK5	362 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	AZI2	Q9H6S1	392 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	JPH1	Q9HDC5	661 aa	Predicted RBP	10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	TMEM260	Q9NX78	707 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	PTPRS	Q13332	1948 aa		10.77	□□□□□ -0.69
NUP50-215	ENST00000484186	MBLAC1	A4D2B0	266 aa	Predicted RBP	10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	LINC01553	A4QN01	128 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	RRN3P2	A6NIE6	340 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	LPXN	O60711	386 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	REC8	O95072	547 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	CHRNA1	P02708	482 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	SCG2	P13521	617 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	INSRR	P14616	1297 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	RPS6KB1	P23443	525 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	PSMA5	P28066	241 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	ZNF76	P36508	570 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	SREBF1	P36956	1147 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	ACTR2	P61160	394 aa		10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	HTRA4	P83105	476 aa	Predicted RBP	10.76	□□□□□ -0.69
NUP50-215	ENST00000484186	SKIV2L	Q15477	1246 aa	Known RBP	10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms