RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 ECHS1P30084 290 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 CTNNA1P35221 906 aaKnown RBP15.7■□□□□ 0.1
NR1H3-220ENST00000481020 GUCY2FP51841 1108 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 GSTO1P78417 241 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 ZNF844Q08AG5 666 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 CALCRLQ16602 461 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 HYIQ5T013 277 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 PPP1R18Q6NYC8 613 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 PNMA5Q96PV4 448 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 JPH2Q9BR39 696 aaPredicted RBP15.7■□□□□ 0.1
NR1H3-220ENST00000481020 NT5C3AQ9H0P0 336 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 MCM9Q9NXL9 1143 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 BTG4Q9NY30 223 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 SMARCAL1Q9NZC9 954 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 DDX20Q9UHI6 824 aaKnown RBP15.7■□□□□ 0.1
NR1H3-220ENST00000481020 MINPP1Q9UNW1 487 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 CEP83Q9Y592 693 aa15.7■□□□□ 0.1
NR1H3-220ENST00000481020 KLRF2D3W0D1 207 aa15.69■□□□□ 0.1
NR1H3-220ENST00000481020 EZRP15311 586 aaKnown RBP15.69■□□□□ 0.1
NR1H3-220ENST00000481020 NF2P35240 595 aa15.69■□□□□ 0.1
NR1H3-220ENST00000481020 PRKCIP41743 596 aa15.69■□□□□ 0.1
NR1H3-220ENST00000481020 HLTFQ14527 1009 aaKnown RBP eCLIP15.69■□□□□ 0.1
NR1H3-220ENST00000481020 FMNL3Q8IVF7 1028 aa15.69■□□□□ 0.1
NR1H3-220ENST00000481020 PARP9Q8IXQ6 854 aa15.69■□□□□ 0.1
NR1H3-220ENST00000481020 ZNF444Q8N0Y2 327 aaPredicted RBP15.69■□□□□ 0.1
NR1H3-220ENST00000481020 ANKRD13CQ8N6S4 541 aa15.69■□□□□ 0.1
NR1H3-220ENST00000481020 TBC1D5Q92609 795 aa15.69■□□□□ 0.1
NR1H3-220ENST00000481020 MKNK2Q9HBH9 465 aa15.69■□□□□ 0.1
NR1H3-220ENST00000481020 SUCLA2Q9P2R7 463 aaPredicted RBP15.69■□□□□ 0.1
NR1H3-220ENST00000481020 NIP7Q9Y221 180 aaKnown RBP eCLIP15.69■□□□□ 0.1
NR1H3-220ENST00000481020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.69■□□□□ 0.1
NR1H3-220ENST00000481020 FTCDO95954 541 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 HIBADHP31937 336 aaKnown RBP15.68■□□□□ 0.1
NR1H3-220ENST00000481020 GBP1P32455 592 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 ERVK-9P63128 1117 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 ANKRD20A8PQ5CZ79 823 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 SLFN11Q7Z7L1 901 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 VPS36Q86VN1 386 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 HOOK3Q86VS8 718 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 LRRC57Q8N9N7 239 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 TBCKQ8TEA7 893 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 DDX12PQ92771 950 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 TATDN2Q93075 761 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 EEF2KMTQ96G04 330 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 LSM14BQ9BX40 385 aaKnown RBP15.68■□□□□ 0.1
NR1H3-220ENST00000481020 RABEP2Q9H5N1 569 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 ESYT3A0FGR9 886 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 FLOT1O75955 427 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 BAG3O95817 575 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 GCFC2P16383 781 aaKnown RBP15.68■□□□□ 0.1
NR1H3-220ENST00000481020 SEC24CP53992 1094 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 PPP4CP60510 307 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 POLR2FP61218 127 aaKnown RBP15.68■□□□□ 0.1
NR1H3-220ENST00000481020 SLC35G1Q2M3R5 365 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 SLC10A5Q5PT55 438 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 FAM26FQ5R3K3 315 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 CYB5D1Q6P9G0 228 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 CCDC65Q8IXS2 484 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 FUKQ8N0W3 1084 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 SEC16BQ96JE7 1060 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 NAP1L3Q99457 506 aaPredicted RBP15.68■□□□□ 0.1
NR1H3-220ENST00000481020 HINFPQ9BQA5 517 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 TMEM47Q9BQJ4 181 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 MXD3Q9BW11 206 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 RAB17Q9H0T7 212 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 GANQ9H2C0 597 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 DAAM1Q9Y4D1 1078 aa15.68■□□□□ 0.1
NR1H3-220ENST00000481020 A0A087X0T9 212 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 TRAF5O00463 557 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 KCNK3O14649 394 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 FAM228BP0C875 321 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 CYP2D6P10635 497 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 ELF1P32519 619 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 NOVP48745 357 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 LMNB2Q03252 620 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 ITIH4Q14624 930 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 SLMAPQ14BN4 828 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 CRELD2Q6UXH1 353 aaPredicted RBP15.67■□□□□ 0.1
NR1H3-220ENST00000481020 ANKS4BQ8N8V4 417 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 CCHCR1Q8TD31 782 aa15.67■□□□□ 0.1
NR1H3-220ENST00000481020 TNRC6CQ9HCJ0 1690 aaKnown RBP15.66■□□□□ 0.1
NR1H3-220ENST00000481020 ZSCAN5CA6NGD5 496 aaPredicted RBP15.66■□□□□ 0.1
NR1H3-220ENST00000481020 SART1O43290 800 aaKnown RBP15.66■□□□□ 0.1
NR1H3-220ENST00000481020 ERCC3P19447 782 aa15.66■□□□□ 0.1
NR1H3-220ENST00000481020 TXKP42681 527 aa15.66■□□□□ 0.1
NR1H3-220ENST00000481020 MRPS25P82663 173 aaKnown RBP15.66■□□□□ 0.1
NR1H3-220ENST00000481020 COASYQ13057 564 aa15.66■□□□□ 0.1
NR1H3-220ENST00000481020 BYSLQ13895 437 aaKnown RBP15.66■□□□□ 0.1
NR1H3-220ENST00000481020 UAP1Q16222 522 aaPredicted RBP15.66■□□□□ 0.1
NR1H3-220ENST00000481020 TMC3Q7Z5M5 1100 aa15.66■□□□□ 0.1
NR1H3-220ENST00000481020 TLCD1Q96CP7 247 aa15.66■□□□□ 0.1
NR1H3-220ENST00000481020 PSMD1Q99460 953 aa15.66■□□□□ 0.1
NR1H3-220ENST00000481020 ATP6V0A4Q9HBG4 840 aa15.66■□□□□ 0.1
NR1H3-220ENST00000481020 VEZTQ9HBM0 779 aa15.66■□□□□ 0.1
NR1H3-220ENST00000481020 NLRC4Q9NPP4 1024 aa15.66■□□□□ 0.1
NR1H3-220ENST00000481020 PPANQ9NQ55 473 aaKnown RBP15.66■□□□□ 0.1
NR1H3-220ENST00000481020 UTP11Q9Y3A2 253 aaKnown RBP15.66■□□□□ 0.1
NR1H3-220ENST00000481020 NKRFO15226 690 aaKnown RBP eCLIP15.65■□□□□ 0.1
NR1H3-220ENST00000481020 ASAP2O43150 1006 aa15.65■□□□□ 0.1
NR1H3-220ENST00000481020 MGRN1O60291 552 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms