RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 MPHOSPH10O00566 681 aaKnown RBP14.29□□□□□ -0.12
CCNL1-216ENST00000475298 OPLAHO14841 1288 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 KRT14P02533 472 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 SMARCA1P28370 1054 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 HERVK_113P62684 666 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 NFIAQ12857 509 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 KCTD1Q719H9 257 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 KCNK18Q7Z418 384 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 ADGRF4Q8IZF3 695 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 LRRC1Q9BTT6 524 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 SEMA6BQ9H3T3 888 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 HAUS4Q9H6D7 363 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 JMJD4Q9H9V9 463 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 SERPINB13Q9UIV8 391 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 PCDHAC2Q9Y5I4 1007 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 A0A1W2PQC6 194 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 FAM196BA6NMK8 535 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 SNHG28P0DPA3 235 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 SRGNP10124 158 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 GBP2P32456 591 aaPredicted RBP14.29□□□□□ -0.12
CCNL1-216ENST00000475298 SHMT1P34896 483 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 ASPRV1Q53RT3 343 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 ZFPM1Q8IX07 1006 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 SP8Q8IXZ3 490 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 MMGT1Q8N4V1 131 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 PARD3BQ8TEW8 1205 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 LMBR1Q8WVP7 490 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 SPDL1Q96EA4 605 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 DNAJC7Q99615 494 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 MAGEF1Q9HAY2 307 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 CAPN11Q9UMQ6 739 aa14.29□□□□□ -0.12
CCNL1-216ENST00000475298 LRRC37AA6NMS7 1700 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 RAD21O60216 631 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 ONECUT3O60422 494 aaPredicted RBP14.28□□□□□ -0.12
CCNL1-216ENST00000475298 SLC8A1P32418 973 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 MTIF2P46199 727 aaKnown RBP14.28□□□□□ -0.12
CCNL1-216ENST00000475298 DNM2P50570 870 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 CACNB3P54284 484 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 MRPS25P82663 173 aaKnown RBP14.28□□□□□ -0.12
CCNL1-216ENST00000475298 ZNF543Q08ER8 600 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 MIIPQ5JXC2 388 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 GPIHBP1Q8IV16 184 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 GLIS3Q8NEA6 775 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 ZC3H12CQ9C0D7 883 aaKnown RBP14.28□□□□□ -0.12
CCNL1-216ENST00000475298 COA1Q9GZY4 146 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 KCNQ5Q9NR82 932 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 ATP6V0A2Q9Y487 856 aa14.28□□□□□ -0.12
CCNL1-216ENST00000475298 KLRG2A4D1S0 409 aaPredicted RBP14.27□□□□□ -0.12
CCNL1-216ENST00000475298 ZNF233A6NK53 670 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 USP17L10C9JJH3 530 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 MGRN1O60291 552 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 HSF2BPO75031 334 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 AP1G2O75843 785 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 TTLL1O95922 423 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 TRIM21P19474 475 aaKnown RBP14.27□□□□□ -0.12
CCNL1-216ENST00000475298 ECM1Q16610 540 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 CCDC96Q2M329 555 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 ANKRD20A8PQ5CZ79 823 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 CDC42EP5Q6NZY7 148 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 SV2BQ7L1I2 683 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 CAGE1Q8TC20 777 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 CAVIN3Q969G5 261 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 CCDC47Q96A33 483 aaKnown RBP14.27□□□□□ -0.12
CCNL1-216ENST00000475298 PCMTD1Q96MG8 357 aaPredicted RBP14.27□□□□□ -0.12
CCNL1-216ENST00000475298 NOC4LQ9BVI4 516 aaKnown RBP14.27□□□□□ -0.12
CCNL1-216ENST00000475298 TTYH3Q9C0H2 523 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 ANKRD31Q8N7Z5 1873 aa14.27□□□□□ -0.12
CCNL1-216ENST00000475298 GOLGA6L7A0A1B0GV03 622 aa14.27□□□□□ -0.13
CCNL1-216ENST00000475298 MDH1P40925 334 aaKnown RBP14.27□□□□□ -0.13
CCNL1-216ENST00000475298 EPHB4P54760 987 aa14.27□□□□□ -0.13
CCNL1-216ENST00000475298 CCDC121Q6ZUS5 278 aa14.27□□□□□ -0.13
CCNL1-216ENST00000475298 PROM2Q8N271 834 aa14.27□□□□□ -0.13
CCNL1-216ENST00000475298 SNX29Q8TEQ0 813 aa14.27□□□□□ -0.13
CCNL1-216ENST00000475298 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.13
CCNL1-216ENST00000475298 LARP4BQ92615 738 aaKnown RBP14.27□□□□□ -0.13
CCNL1-216ENST00000475298 ITFG2Q969R8 447 aa14.27□□□□□ -0.13
CCNL1-216ENST00000475298 CYFIP2Q96F07 1278 aa14.27□□□□□ -0.13
CCNL1-216ENST00000475298 CDK5RAP3Q96JB5 506 aa14.27□□□□□ -0.13
CCNL1-216ENST00000475298 BICDL2A1A5D9 508 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 IDEP14735 1019 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCNL1-216ENST00000475298 AMPD3Q01432 767 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 SLC7A5Q01650 507 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 XRCC4Q13426 336 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 CCDC122Q5T0U0 273 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 CNNM4Q6P4Q7 775 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 EMBQ6PCB8 327 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 IQCKQ8N0W5 287 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 RUBCNQ92622 972 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 HOOK2Q96ED9 719 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 RUFY1Q96T51 708 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 PNMA6FA0A0J9YX94 578 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 RCCD1A6NED2 376 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 NR1D1P20393 614 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 PEX19P40855 299 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 RWDD2BP57060 319 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 LRRC41Q15345 812 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 NBPF9Q3BBW0 867 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 CREG2Q8IUH2 290 aa14.26□□□□□ -0.13
CCNL1-216ENST00000475298 NOC3LQ8WTT2 800 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms