RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 RRAGAQ7L523 313 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 CRAMP1Q96RY5 1269 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 BCAS3Q9H6U6 928 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 AGPAT5Q9NUQ2 364 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 DDX20Q9UHI6 824 aaKnown RBP13.54□□□□□ -0.24
USP11-206ENST00000469080 RBAK-RBAKDNI3L0D1 243 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 RNF225M0QZC1 329 aaPredicted RBP13.54□□□□□ -0.24
USP11-206ENST00000469080 PPP4CP60510 307 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 RAPGEF1Q13905 1077 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 RAD9BQ6WBX8 426 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 TC2NQ8N9U0 490 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 LMBR1Q8WVP7 490 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 RIN2Q8WYP3 895 aaPredicted RBP13.54□□□□□ -0.24
USP11-206ENST00000469080 GLIS2Q9BZE0 524 aaPredicted RBP13.54□□□□□ -0.24
USP11-206ENST00000469080 MYH3P11055 1940 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 ZBTB39O15060 712 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 ATRNO75882 1429 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 NDUFB10O96000 172 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 RAB27AP51159 221 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 ZNF543Q08ER8 600 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 SLC35F6Q8N357 371 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 IKZF4Q9H2S9 585 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 LMCD1Q9NZU5 365 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 RGS17Q9UGC6 210 aaPredicted RBP13.54□□□□□ -0.24
USP11-206ENST00000469080 NWD2Q9ULI1 1742 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 PSMD14O00487 310 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 LAMB3Q13751 1172 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 ZNF658Q5TYW1 1059 aaPredicted RBP13.53□□□□□ -0.24
USP11-206ENST00000469080 ZNF772Q68DY9 489 aaPredicted RBP13.53□□□□□ -0.24
USP11-206ENST00000469080 SAMD7Q7Z3H4 446 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 NRAPQ86VF7 1730 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 TTC26A0AVF1 554 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 MYMKA6NI61 221 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 BUB1O43683 1085 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 IL1R1P14778 569 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 DPEP1P16444 411 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 TCP11X2Q5H9J9 407 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 DLK2Q6UY11 383 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 DRAXINQ8NBI3 349 aaPredicted RBP13.53□□□□□ -0.24
USP11-206ENST00000469080 CTAGE1Q96RT6 745 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 HDAC6Q9UBN7 1215 aa13.53□□□□□ -0.24
USP11-206ENST00000469080 NUP188Q5SRE5 1749 aa13.52□□□□□ -0.24
USP11-206ENST00000469080 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.24
USP11-206ENST00000469080 PYGBP11216 843 aa13.52□□□□□ -0.24
USP11-206ENST00000469080 TPP2P29144 1249 aaPredicted RBP13.52□□□□□ -0.24
USP11-206ENST00000469080 SNCBQ16143 134 aa13.52□□□□□ -0.24
USP11-206ENST00000469080 B4GALNT2Q8NHY0 566 aa13.52□□□□□ -0.24
USP11-206ENST00000469080 ZCWPW1Q9H0M4 648 aa13.52□□□□□ -0.24
USP11-206ENST00000469080 HDAC9Q9UKV0 1011 aa13.52□□□□□ -0.24
USP11-206ENST00000469080 PNMA6FA0A0J9YX94 578 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 NDUFAB1O14561 156 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 PRPF6O94906 941 aaKnown RBP13.52□□□□□ -0.25
USP11-206ENST00000469080 OATP04181 439 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 BMP3P12645 472 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 CDC25CP30307 473 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 PRPHP41219 470 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 CAPRIN2Q6IMN6 1127 aaKnown RBP13.52□□□□□ -0.25
USP11-206ENST00000469080 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
USP11-206ENST00000469080 CNKSR1Q969H4 720 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 AKT1S1Q96B36 256 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 CCDC42Q96M95 316 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 ANO3Q9BYT9 981 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 GBP3Q9H0R5 595 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 ZBTB5O15062 677 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 GCNT3O95395 438 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 TMC4Q7Z404 712 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 PODNQ7Z5L7 613 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 SYCP3Q8IZU3 236 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 TTLL6Q8N841 843 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 ELMO3Q96BJ8 720 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 BHMT2Q9H2M3 363 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 PANK4Q9NVE7 773 aa13.52□□□□□ -0.25
USP11-206ENST00000469080 MYBL1P10243 752 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 ASPRV1Q53RT3 343 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 CC2D2BQ6DHV5 1058 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 TRIM65Q6PJ69 517 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 RINLQ6ZS11 566 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 RSRC2Q7L4I2 434 aaKnown RBP13.51□□□□□ -0.25
USP11-206ENST00000469080 NIM1KQ8IY84 436 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 FAM76AQ8TAV0 307 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 TSG101Q99816 390 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 L1RE1Q9UN81 338 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 PPP1R11O60927 126 aaPredicted RBP13.51□□□□□ -0.25
USP11-206ENST00000469080 PLEKP08567 350 aaPredicted RBP13.51□□□□□ -0.25
USP11-206ENST00000469080 FAM163BP0C2L3 166 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 GNGT1P63211 74 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 TTLL12Q14166 644 aaPredicted RBP13.51□□□□□ -0.25
USP11-206ENST00000469080 SPA17Q15506 151 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 PNKPQ96T60 521 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 TRIM9Q9C026 710 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 ERCC5P28715 1186 aaPredicted RBP13.51□□□□□ -0.25
USP11-206ENST00000469080 TRAPPC10P48553 1259 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 IRAK1P51617 712 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 CRY2Q49AN0 593 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 NAALADL2Q58DX5 795 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 PDXDC2PQ6P474 469 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 EZH1Q92800 747 aaPredicted RBP13.51□□□□□ -0.25
USP11-206ENST00000469080 TBC1D31Q96DN5 1066 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 CCDC114Q96M63 670 aa13.51□□□□□ -0.25
USP11-206ENST00000469080 ZNF341Q9BYN7 854 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms