RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 NKX2-4Q9H2Z4 354 aa21.62■■□□□ 1.05
COL5A1-203ENST00000460264 RNPEPQ9H4A4 650 aa21.62■■□□□ 1.05
COL5A1-203ENST00000460264 NCOA5Q9HCD5 579 aaKnown RBP21.62■■□□□ 1.05
COL5A1-203ENST00000460264 GSTTP1A0A1W2PQM5 241 aa21.61■■□□□ 1.05
COL5A1-203ENST00000460264 TREHO43280 583 aa21.61■■□□□ 1.05
COL5A1-203ENST00000460264 BAIAP3O94812 1187 aa21.61■■□□□ 1.05
COL5A1-203ENST00000460264 FOSL2P15408 326 aa21.61■■□□□ 1.05
COL5A1-203ENST00000460264 IFNAR1P17181 557 aa21.61■■□□□ 1.05
COL5A1-203ENST00000460264 MBTPS1Q14703 1052 aa21.61■■□□□ 1.05
COL5A1-203ENST00000460264 CEP55Q53EZ4 464 aa21.61■■□□□ 1.05
COL5A1-203ENST00000460264 CCDC12Q8WUD4 166 aaPredicted RBP21.61■■□□□ 1.05
COL5A1-203ENST00000460264 SEPT1Q8WYJ6 367 aa21.61■■□□□ 1.05
COL5A1-203ENST00000460264 SLC9A7Q96T83 725 aa21.61■■□□□ 1.05
COL5A1-203ENST00000460264 RNF26Q9BY78 433 aaPredicted RBP21.61■■□□□ 1.05
COL5A1-203ENST00000460264 JPH1Q9HDC5 661 aaPredicted RBP21.61■■□□□ 1.05
COL5A1-203ENST00000460264 SETD4Q9NVD3 440 aa21.61■■□□□ 1.05
COL5A1-203ENST00000460264 PCDHA11Q9Y5I1 949 aa21.61■■□□□ 1.05
COL5A1-203ENST00000460264 ADAMTS3O15072 1205 aa21.6■■□□□ 1.05
COL5A1-203ENST00000460264 PPFIA3O75145 1194 aa21.6■■□□□ 1.05
COL5A1-203ENST00000460264 THPOP40225 353 aa21.6■■□□□ 1.05
COL5A1-203ENST00000460264 CCT2P78371 535 aaKnown RBP21.6■■□□□ 1.05
COL5A1-203ENST00000460264 ARHGAP4P98171 946 aa21.6■■□□□ 1.05
COL5A1-203ENST00000460264 AKAP17AQ02040 695 aaKnown RBP21.6■■□□□ 1.05
COL5A1-203ENST00000460264 JAKMIP3Q5VZ66 844 aa21.6■■□□□ 1.05
COL5A1-203ENST00000460264 MAFAQ8NHW3 353 aaPredicted RBP21.6■■□□□ 1.05
COL5A1-203ENST00000460264 LMBR1Q8WVP7 490 aa21.6■■□□□ 1.05
COL5A1-203ENST00000460264 SLC26A6Q9BXS9 759 aa21.6■■□□□ 1.05
COL5A1-203ENST00000460264 SLC28A3Q9HAS3 691 aa21.6■■□□□ 1.05
COL5A1-203ENST00000460264 MICAL3Q7RTP6 2002 aa21.6■■□□□ 1.05
COL5A1-203ENST00000460264 SIP14410 1827 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 EMSYQ7Z589 1322 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 MEIS1O00470 390 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 CENPBP07199 599 aaPredicted RBP21.59■■□□□ 1.05
COL5A1-203ENST00000460264 ARP10275 920 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 GNAT1P11488 350 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 MYOGP15173 224 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 ADAM17P78536 824 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 CNKSR3Q6P9H4 555 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 REXO1Q8N1G1 1221 aaKnown RBP21.59■■□□□ 1.05
COL5A1-203ENST00000460264 PHOSPHO2Q8TCD6 241 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 CRYGNQ8WXF5 182 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 AGO4Q9HCK5 861 aaKnown RBP21.59■■□□□ 1.05
COL5A1-203ENST00000460264 C6orf50Q9HD87 102 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 SLC9A2Q9UBY0 812 aa21.59■■□□□ 1.05
COL5A1-203ENST00000460264 NFASCO94856 1347 aa21.58■■□□□ 1.05
COL5A1-203ENST00000460264 ITGB3BPQ13352 177 aaPredicted RBP21.58■■□□□ 1.05
COL5A1-203ENST00000460264 TCTN1Q2MV58 587 aa21.58■■□□□ 1.05
COL5A1-203ENST00000460264 NIPA1Q7RTP0 329 aa21.58■■□□□ 1.05
COL5A1-203ENST00000460264 SDF4Q9BRK5 362 aa21.58■■□□□ 1.05
COL5A1-203ENST00000460264 ERAP1Q9NZ08 941 aa21.58■■□□□ 1.05
COL5A1-203ENST00000460264 NRCAMQ92823 1304 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 RSPH10B2B2RC85 870 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 RBAK-RBAKDNI3L0D1 243 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 CAND2O75155 1236 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 RSPH10BP0C881 870 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 MARK3P27448 753 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 GNA11P29992 359 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 KCNJ6P48051 423 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 WDR5P61964 334 aaKnown RBP21.57■■□□□ 1.04
COL5A1-203ENST00000460264 PPP2R2DQ66LE6 453 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 MCTP2Q6DN12 878 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 HERC6Q8IVU3 1022 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 CCDC148Q8NFR7 591 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 GLG1Q92896 1179 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 ZNF274Q96GC6 653 aaPredicted RBP21.57■■□□□ 1.04
COL5A1-203ENST00000460264 LARP6Q9BRS8 491 aaKnown RBP21.57■■□□□ 1.04
COL5A1-203ENST00000460264 SMARCAD1Q9H4L7 1026 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 PRDM12Q9H4Q4 367 aa21.57■■□□□ 1.04
COL5A1-203ENST00000460264 UNC80Q8N2C7 3258 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 TRANK1O15050 2925 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 PRUNE2Q8WUY3 3088 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 FAM86B1E9PN63 330 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 LGR5O75473 907 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 CYP3A4P08684 503 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 FAM86B2P0C5J1 330 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 ZNF76P36508 570 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 PPFIA1Q13136 1202 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 PCYT2Q99447 389 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 PDRG1Q9NUG6 133 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 VPS54Q9P1Q0 977 aa21.56■■□□□ 1.04
COL5A1-203ENST00000460264 A0A0C4DFX4 3053 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 IGLV3-22A0A075B6J6 115 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 ABHD14A-ACY1A0A1B0GW23 586 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 CA3P07451 260 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 CTSHP09668 335 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 ACTR2P61160 394 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 DEFB103AP81534 67 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 PLA2G4DQ86XP0 818 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 TRIM22Q8IYM9 498 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 BICD2Q8TD16 824 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 RASGRP4Q8TDF6 673 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 SH3GLB2Q9NR46 395 aa21.55■■□□□ 1.04
COL5A1-203ENST00000460264 GRIK4Q16099 956 aa21.54■■□□□ 1.04
COL5A1-203ENST00000460264 GAS2L1Q99501 681 aaPredicted RBP21.54■■□□□ 1.04
COL5A1-203ENST00000460264 WDR81Q562E7 1941 aa21.53■■□□□ 1.04
COL5A1-203ENST00000460264 CPLX1O14810 134 aa21.53■■□□□ 1.04
COL5A1-203ENST00000460264 EFCAB14O75071 495 aa21.53■■□□□ 1.04
COL5A1-203ENST00000460264 ANAPC15P60006 121 aa21.53■■□□□ 1.04
COL5A1-203ENST00000460264 SSRP1Q08945 709 aaKnown RBP21.53■■□□□ 1.04
COL5A1-203ENST00000460264 STK3Q13188 491 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms