RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 SPAG5Q96R06 1193 aa21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 SHOX2O60902 331 aaPredicted RBP21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 PSMC6P62333 389 aa21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 CYP4A11Q02928 519 aa21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 TADA2BQ86TJ2 420 aa21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 SCFD1Q8WVM8 642 aa21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 DDX4Q9NQI0 724 aaKnown RBP21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 LEMD3Q9Y2U8 911 aa21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 NR2F2P24468 414 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 CACNB3P54284 484 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 PTK2Q05397 1052 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 KCNH2Q12809 1159 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 ASIC2Q16515 512 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 PSTPIP2Q9H939 334 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 EMILIN3Q9NT22 766 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 GRID2IPA4D2P6 1211 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 PJA2O43164 708 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 PRLRP16471 622 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 CEP85LQ5SZL2 805 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 ADAT2Q7Z6V5 191 aaKnown RBP21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 STRCQ7RTU9 1775 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 SFI1A8K8P3 1242 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 TMEM119Q4V9L6 283 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 NAA35Q5VZE5 725 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 C8orf37Q96NL8 207 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 RIC8AQ9NPQ8 531 aa21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 THRAP3Q9Y2W1 955 aaKnown RBP21.51■■□□□ 1.03
CNEP1R1-203ENST00000458059 ZCWPW2Q504Y3 356 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 KAT2BQ92831 832 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 SH3GL2Q99962 352 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 CLIC2O15247 247 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 MED24O75448 989 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 NAB2Q15742 525 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 SLC18A3Q16572 532 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 TAF4BQ92750 862 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 TRIM31Q9BZY9 425 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 DDX47Q9H0S4 455 aaKnown RBP21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 GGA1Q9UJY5 639 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 BCS1LQ9Y276 419 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 DAGLAQ9Y4D2 1042 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 NAV1Q8NEY1 1877 aa21.5■■□□□ 1.03
CNEP1R1-203ENST00000458059 SSU72P8A0A1W2PR75 194 aa21.49■■□□□ 1.03
CNEP1R1-203ENST00000458059 CUL5Q93034 780 aa21.49■■□□□ 1.03
CNEP1R1-203ENST00000458059 ERLIN2O94905 339 aa21.49■■□□□ 1.03
CNEP1R1-203ENST00000458059 PAK2Q13177 524 aa21.49■■□□□ 1.03
CNEP1R1-203ENST00000458059 POLLQ9UGP5 575 aa21.49■■□□□ 1.03
CNEP1R1-203ENST00000458059 DDX60LQ5H9U9 1706 aaKnown RBP21.49■■□□□ 1.03
CNEP1R1-203ENST00000458059 KCNA1Q09470 495 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 TCP10Q12799 353 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 PDIA5Q14554 519 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 USH1GQ495M9 461 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 FAM196AQ6ZSG2 479 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 ZNF571Q7Z3V5 609 aaPredicted RBP21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 CCDC65Q8IXS2 484 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 PLAAQ9Y263 795 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 CNTNAP4Q9C0A0 1308 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 RSPH10B2B2RC85 870 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 RSPH10BP0C881 870 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 PRR16Q569H4 304 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 TRIM59Q8IWR1 403 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 EFCAB13Q8IY85 973 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 PPANQ9NQ55 473 aaKnown RBP21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 RREB1Q92766 1687 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 SEMA3FQ13275 785 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 RPS6KA1Q15418 735 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 SAMD1Q6SPF0 538 aaPredicted RBP21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 AJAP1Q9UKB5 411 aaPredicted RBP21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 HDAC9Q9UKV0 1011 aa21.48■■□□□ 1.03
CNEP1R1-203ENST00000458059 PNMA6FA0A0J9YX94 578 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 ESYT2A0FGR8 921 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 CYP11B2P19099 503 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 ZNF543Q08ER8 600 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 COBLL1Q53SF7 1204 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 MEI1Q5TIA1 1274 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 ZNF572Q7Z3I7 529 aaPredicted RBP21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 PIK3R5Q8WYR1 880 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 ITGA4P13612 1032 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 CASP4P49662 377 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 ERVK-9P63128 1117 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 ALS2CLQ60I27 953 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 RNF10Q8N5U6 811 aaKnown RBP21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 INPP4AQ96PE3 977 aaPredicted RBP21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 PCDHB13Q9Y5F0 798 aa21.47■■□□□ 1.03
CNEP1R1-203ENST00000458059 MYBP10242 640 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 COPB2P35606 906 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 ITIH3Q06033 890 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 ASPRV1Q53RT3 343 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 RNF187Q5TA31 235 aaPredicted RBP21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 SFR1Q86XK3 245 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 KSR1Q8IVT5 923 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 CAVIN3Q969G5 261 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 IQCDQ96DY2 449 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 GDF3Q9NR23 364 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 CETN3O15182 167 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 NR1D1P20393 614 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 IBSPP21815 317 aaPredicted RBP21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 MRPL12P52815 198 aaKnown RBP21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 IKQ13123 557 aaPredicted RBP21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 PSMD2Q13200 908 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 DOK7Q18PE1 504 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms