RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 OXER1Q8TDS5 423 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 EMID1Q96A84 441 aaPredicted RBP11.47□□□□□ -0.57
RFX3-210ENST00000457373 SENP7Q9BQF6 1050 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 PRDM5Q9NQX1 630 aaPredicted RBP11.47□□□□□ -0.57
RFX3-210ENST00000457373 KCNH7Q9NS40 1196 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 PRKAG2Q9UGJ0 569 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 TELO2Q9Y4R8 837 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 CENPFP49454 3210 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 GRIN2DO15399 1336 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 CCDC194A0A1B0GVG4 234 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 DCDC2CA8MYV0 355 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 DDX39AO00148 427 aaKnown RBP11.46□□□□□ -0.57
RFX3-210ENST00000457373 MEIS1O00470 390 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 TLR3O15455 904 aaKnown RBP11.46□□□□□ -0.57
RFX3-210ENST00000457373 GALR2O43603 387 aaPredicted RBP11.46□□□□□ -0.57
RFX3-210ENST00000457373 EDIL3O43854 480 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 PPFIA4O75335 1185 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 ZNF286BP0CG31 522 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 KRT2P35908 639 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 HMGN5P82970 282 aaKnown RBP11.46□□□□□ -0.57
RFX3-210ENST00000457373 INF2Q27J81 1249 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 NBPF20Q3BBV1 942 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 PRR16Q569H4 304 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 METTL7BQ6UX53 244 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 PIK3AP1Q6ZUJ8 805 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 KRT25Q7Z3Z0 450 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 SH3RF1Q7Z6J0 888 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 CRYGNQ8WXF5 182 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 C8orf76Q96K31 380 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 GPR20Q99678 358 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 SDF4Q9BRK5 362 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 AGO4Q9HCK5 861 aaKnown RBP11.46□□□□□ -0.57
RFX3-210ENST00000457373 BRMS1Q9HCU9 246 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 BOLA1Q9Y3E2 137 aa11.46□□□□□ -0.57
RFX3-210ENST00000457373 MROH7Q68CQ1 1323 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 IGLV3-22A0A075B6J6 115 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 BTBD18B2RXH4 712 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 MMP1P03956 469 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 CLTBP09497 229 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 CIITAP33076 1130 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 PSEN2P49810 448 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 USP11P51784 963 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 FAAP100Q0VG06 881 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 NR5A1Q13285 461 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 LETM2Q2VYF4 491 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 PRPF38BQ5VTL8 546 aaKnown RBP11.45□□□□□ -0.58
RFX3-210ENST00000457373 NIPA1Q7RTP0 329 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 DIS3L2Q8IYB7 885 aaKnown RBP11.45□□□□□ -0.58
RFX3-210ENST00000457373 SLC43A3Q8NBI5 491 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 KAT2BQ92831 832 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 TOX2Q96NM4 488 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 TMEM39AQ9NV64 488 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 SLC9A2Q9UBY0 812 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 SCN10AQ9Y5Y9 1956 aa11.45□□□□□ -0.58
RFX3-210ENST00000457373 NFASCO94856 1347 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 GSTTP1A0A1W2PQM5 241 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 FAM205CA6NFA0 338 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 TDP2O95551 362 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 LGALS2P05162 132 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 TCF7P36402 384 aaPredicted RBP11.44□□□□□ -0.58
RFX3-210ENST00000457373 SETQ01105 290 aaPredicted RBP11.44□□□□□ -0.58
RFX3-210ENST00000457373 ITGB3BPQ13352 177 aaPredicted RBP11.44□□□□□ -0.58
RFX3-210ENST00000457373 SAFBQ15424 915 aaKnown RBP eCLIP11.44□□□□□ -0.58
RFX3-210ENST00000457373 KIAA0753Q2KHM9 967 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 EARS2Q5JPH6 523 aaKnown RBP11.44□□□□□ -0.58
RFX3-210ENST00000457373 ANKRD33Q7Z3H0 272 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 FAM126BQ8IXS8 530 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 SEPT1Q8WYJ6 367 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 ZNF577Q9BSK1 485 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 KATNAL1Q9BW62 490 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 JPH1Q9HDC5 661 aaPredicted RBP11.44□□□□□ -0.58
RFX3-210ENST00000457373 PDLIM7Q9NR12 457 aa11.44□□□□□ -0.58
RFX3-210ENST00000457373 TRIM43BA6NCK2 446 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 HAS3O00219 553 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 IPO5O00410 1097 aaKnown RBP11.43□□□□□ -0.58
RFX3-210ENST00000457373 B4GALT4O60513 344 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 CD4P01730 458 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 HOXD8P13378 290 aaPredicted RBP11.43□□□□□ -0.58
RFX3-210ENST00000457373 RAG1P15918 1043 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 GJB2P29033 226 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 MDM2Q00987 491 aaPredicted RBP11.43□□□□□ -0.58
RFX3-210ENST00000457373 NEK8Q86SG6 692 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 C7orf31Q8N865 590 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 TRIM43Q96BQ3 446 aaPredicted RBP11.43□□□□□ -0.58
RFX3-210ENST00000457373 C16orf70Q9BSU1 422 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 SEZ6LQ9BYH1 1024 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 TRPV6Q9H1D0 765 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 HDAC6Q9UBN7 1215 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 SMC3Q9UQE7 1217 aa11.43□□□□□ -0.58
RFX3-210ENST00000457373 KAT6AQ92794 2004 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 TRIP12Q14669 1992 aaPredicted RBP11.42□□□□□ -0.58
RFX3-210ENST00000457373 H3BRB1 525 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 MSH4O15457 936 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 DHX15O43143 795 aaKnown RBP11.42□□□□□ -0.58
RFX3-210ENST00000457373 CCNT1O60563 726 aaKnown RBP11.42□□□□□ -0.58
RFX3-210ENST00000457373 F2P00734 622 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 ACTR2P61160 394 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 PTPN11Q06124 597 aaPredicted RBP11.42□□□□□ -0.58
RFX3-210ENST00000457373 GNL2Q13823 731 aaKnown RBP11.42□□□□□ -0.58
RFX3-210ENST00000457373 Q4G0T1 1027 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms