RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 A0A1B0GUL6 1792 aa15.02□□□□□ -0.01
PTPRE-204ENST00000455661 NT5C2P49902 561 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 GRB10Q13322 594 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 BYSLQ13895 437 aaKnown RBP15.01□□□□□ -0.01
PTPRE-204ENST00000455661 ENOX2Q16206 610 aaKnown RBP15.01□□□□□ -0.01
PTPRE-204ENST00000455661 TMEM266Q2M3C6 531 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 FMNL3Q8IVF7 1028 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 MYOCDQ8IZQ8 938 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.01□□□□□ -0.01
PTPRE-204ENST00000455661 LZTS2Q9BRK4 669 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 AP1M1Q9BXS5 423 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 PACSIN1Q9BY11 444 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 ZMYND12Q9H0C1 365 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 AIPL1Q9NZN9 384 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 PHF20L1A8MW92 1017 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 KRIT1O00522 736 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 GNA14O95837 355 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 DRD4P21917 467 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 EPS15P42566 896 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 EIF3BP55884 814 aaKnown RBP15.01□□□□□ -0.01
PTPRE-204ENST00000455661 UBE4AQ14139 1066 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 FAM133AQ8N9E0 248 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 CCDC197Q8NCU1 140 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 CENPTQ96BT3 561 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 NSUN4Q96CB9 384 aaKnown RBP15.01□□□□□ -0.01
PTPRE-204ENST00000455661 FAM212AQ96EL1 285 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 RSRC1Q96IZ7 334 aaKnown RBP15.01□□□□□ -0.01
PTPRE-204ENST00000455661 SHANK3Q9BYB0 1731 aa15.01□□□□□ -0.01
PTPRE-204ENST00000455661 COL5A2P05997 1499 aaPredicted RBP15.01□□□□□ -0.01
PTPRE-204ENST00000455661 SMCO2A6NFE2 343 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 BACH1O14867 736 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 TRIM37O94972 964 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 EVA1CP58658 441 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 LRRC41Q15345 812 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 SOGA3Q5TF21 947 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 ZNF384Q8TF68 577 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 RAB34Q9BZG1 259 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 NEUROG2Q9H2A3 272 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 SLITRK6Q9H5Y7 841 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 FAM114A2Q9NRY5 505 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15□□□□□ -0.01
PTPRE-204ENST00000455661 CCT8L1PA6NM43 557 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 BHMG1C9JSJ3 638 aaPredicted RBP15□□□□□ -0.01
PTPRE-204ENST00000455661 DAPK3O43293 454 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 CYTH3O43739 400 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 ADAMTS2O95450 1211 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 ATP6V1G2O95670 118 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 ELF3P78545 371 aaPredicted RBP15□□□□□ -0.01
PTPRE-204ENST00000455661 DHX9Q08211 1270 aaKnown RBP15□□□□□ -0.01
PTPRE-204ENST00000455661 PPP1R7Q15435 360 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 TMC3Q7Z5M5 1100 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 LMBR1Q8WVP7 490 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 RAD54LQ92698 747 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 CEP63Q96MT8 703 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 DDX47Q9H0S4 455 aaKnown RBP15□□□□□ -0.01
PTPRE-204ENST00000455661 IL17RBQ9NRM6 502 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 MCM9Q9NXL9 1143 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 MTMR7Q9Y216 660 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 UTP11Q9Y3A2 253 aaKnown RBP15□□□□□ -0.01
PTPRE-204ENST00000455661 NOC2LQ9Y3T9 749 aaKnown RBP15□□□□□ -0.01
PTPRE-204ENST00000455661 NHSL1Q5SYE7 1610 aa15□□□□□ -0.01
PTPRE-204ENST00000455661 COL1A1P02452 1464 aaPredicted RBP14.99□□□□□ -0.01
PTPRE-204ENST00000455661 PPIP5K2O43314 1243 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 MECOMQ03112 1051 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 CALCRLQ16602 461 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 PARP10Q53GL7 1025 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 HOOK3Q86VS8 718 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 DDX12PQ92771 950 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 PNMA5Q96PV4 448 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 XPO6Q96QU8 1125 aaKnown RBP14.99□□□□□ -0.01
PTPRE-204ENST00000455661 BAIAP2L1Q9UHR4 511 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 CTNND1O60716 968 aaKnown RBP14.99□□□□□ -0.01
PTPRE-204ENST00000455661 FLT3P36888 993 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 ERMARDQ5T6L9 678 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 HIBCHQ6NVY1 386 aaPredicted RBP14.99□□□□□ -0.01
PTPRE-204ENST00000455661 TLDC1Q6P9B6 456 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 TBCKQ8TEA7 893 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 CUL5Q93034 780 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 SLC4A9Q96Q91 983 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 MKNK2Q9HBH9 465 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 NOD2Q9HC29 1040 aa14.99□□□□□ -0.01
PTPRE-204ENST00000455661 BZW2Q9Y6E2 419 aaKnown RBP14.99□□□□□ -0.01
PTPRE-204ENST00000455661 LAMB1P07942 1786 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 F8VZ95 297 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 OPLAHO14841 1288 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 NEBLO76041 1014 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 GSTA1P08263 222 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 FXR2P51116 673 aaKnown RBP eCLIP14.98□□□□□ -0.01
PTPRE-204ENST00000455661 SPDYCQ5MJ68 293 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 KRT79Q5XKE5 535 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 METTL13Q8N6R0 699 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 FAM129AQ9BZQ8 928 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 AMACRQ9UHK6 382 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.98□□□□□ -0.01
PTPRE-204ENST00000455661 PALM3A6NDB9 673 aaPredicted RBP14.98□□□□□ -0.01
PTPRE-204ENST00000455661 BUB1BO60566 1050 aaPredicted RBP14.98□□□□□ -0.01
PTPRE-204ENST00000455661 TSPY3P0CV98 308 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 TSPY8P0CW00 308 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 SLC8A3P57103 927 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 NAA25Q14CX7 972 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms