RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 DDX12PQ92771 950 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 BHMT2Q9H2M3 363 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 CUEDC2Q9H467 287 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 SPC25Q9HBM1 224 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 ANKFY1Q9P2R3 1169 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 E9PMD0 336 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 DLATP10515 647 aaKnown RBP11.6□□□□□ -0.55
TOP3B-210ENST00000444502 BMP6P22004 513 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 MCM3P25205 808 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 CCT5P48643 541 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 MMP14P50281 582 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 MAP3K9P80192 1104 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 KLHL30Q0D2K2 578 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 MTERF2Q49AM1 385 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 CEP170P1Q96L14 293 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 FZD1Q9UP38 647 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 ADGRG1Q9Y653 693 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 ABCB11O95342 1321 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 A0A1B0GTH6 734 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 ZMYND10O75800 440 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 NDUFA10O95299 355 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 NR1I3Q14994 352 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 PIK3R5Q8WYR1 880 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 ZNF668Q96K58 619 aaPredicted RBP11.59□□□□□ -0.55
TOP3B-210ENST00000444502 CHP1Q99653 195 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 PDGFDQ9GZP0 370 aaPredicted RBP11.59□□□□□ -0.55
TOP3B-210ENST00000444502 HAUS4Q9H6D7 363 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 ADD3Q9UEY8 706 aaKnown RBP11.59□□□□□ -0.55
TOP3B-210ENST00000444502 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 DDTLA6NHG4 134 aaPredicted RBP11.59□□□□□ -0.55
TOP3B-210ENST00000444502 GOLGA6L10A6NI86 522 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 ECE1P42892 770 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 STK4Q13043 487 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 LONRF2Q1L5Z9 754 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 ACER1Q8TDN7 264 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 DCAF4Q8WV16 495 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 FAM151AQ8WW52 585 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 ABHD10Q9NUJ1 306 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 SERPINA10Q9UK55 444 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 PPP1R3GB7ZBB8 358 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 CALUO43852 315 aaPredicted RBP11.59□□□□□ -0.55
TOP3B-210ENST00000444502 KIF1CO43896 1103 aaKnown RBP11.59□□□□□ -0.55
TOP3B-210ENST00000444502 NEFHP12036 1026 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 ARHGAP4P98171 946 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 TRPC3Q13507 836 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 KIF22Q14807 665 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 RNF217Q8TC41 542 aa11.59□□□□□ -0.55
TOP3B-210ENST00000444502 LMNB1P20700 586 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 SFMBT2Q5VUG0 894 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 RAD9BQ6WBX8 426 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 C16orf86Q6ZW13 317 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 OTUD6BQ8N6M0 293 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 SPZ1Q9BXG8 430 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
TOP3B-210ENST00000444502 PDHBP11177 359 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 STAT3P40763 770 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 PPP4CP60510 307 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 MAP2K1Q02750 393 aaPredicted RBP11.58□□□□□ -0.56
TOP3B-210ENST00000444502 EFCAB13Q8IY85 973 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 DNAI2Q9GZS0 605 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.58□□□□□ -0.56
TOP3B-210ENST00000444502 PCDHAC2Q9Y5I4 1007 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 GSTTP1A0A1W2PQM5 241 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 INO80B-WBP1J3KQ70 363 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 CLIC2O15247 247 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 CD19P15391 556 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 ZNF543Q08ER8 600 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 ASIC2Q16515 512 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 WDR44Q5JSH3 913 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 PDXDC2PQ6P474 469 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 HDXQ7Z353 690 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 SRGAP1Q7Z6B7 1085 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 TAX1BP1Q86VP1 789 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 LDHDQ86WU2 507 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 APOL6Q9BWW8 343 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 RTFDC1Q9BY42 306 aaPredicted RBP11.58□□□□□ -0.56
TOP3B-210ENST00000444502 PARD6BQ9BYG5 372 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 TRIM9Q9C026 710 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 INO80BQ9C086 356 aaPredicted RBP11.58□□□□□ -0.56
TOP3B-210ENST00000444502 FHDC1Q9C0D6 1143 aaPredicted RBP11.58□□□□□ -0.56
TOP3B-210ENST00000444502 MAGEF1Q9HAY2 307 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 COL4A3BPQ9Y5P4 624 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 KCPQ6ZWJ8 1503 aa11.58□□□□□ -0.56
TOP3B-210ENST00000444502 POTEB3A0JP26 581 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 POTECB2RU33 542 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 HNRNPDLO14979 420 aaKnown RBP11.57□□□□□ -0.56
TOP3B-210ENST00000444502 PLA2G4BP0C869 781 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 GCFC2P16383 781 aaKnown RBP11.57□□□□□ -0.56
TOP3B-210ENST00000444502 LIG4P49917 911 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 MRPS25P82663 173 aaKnown RBP11.57□□□□□ -0.56
TOP3B-210ENST00000444502 AP1ARQ63HQ0 302 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 ANKRD40Q6AI12 368 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 POTEBQ6S5H4 581 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 SLC7A3Q8WY07 619 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 NDST4Q9H3R1 872 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 THAP9Q9H5L6 903 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 STK17AQ9UEE5 414 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 ARMCX3Q9UH62 379 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms