RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 TCF7P36402 384 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-219ENST00000440240 KCNQ1P51787 676 aa23.81■■□□□ 1.4
CPNE1-219ENST00000440240 HTRA4P83105 476 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-219ENST00000440240 FAM26DQ5JW98 314 aa23.81■■□□□ 1.4
CPNE1-219ENST00000440240 TMTC3Q6ZXV5 915 aa23.81■■□□□ 1.4
CPNE1-219ENST00000440240 SGMS1Q86VZ5 419 aa23.81■■□□□ 1.4
CPNE1-219ENST00000440240 GDPD5Q8WTR4 605 aa23.81■■□□□ 1.4
CPNE1-219ENST00000440240 LMBR1Q8WVP7 490 aa23.81■■□□□ 1.4
CPNE1-219ENST00000440240 APBB2Q92870 758 aa23.81■■□□□ 1.4
CPNE1-219ENST00000440240 ATP9AO75110 1047 aa23.8■■□□□ 1.4
CPNE1-219ENST00000440240 KCNA2P16389 499 aa23.8■■□□□ 1.4
CPNE1-219ENST00000440240 ITGB5P18084 799 aa23.8■■□□□ 1.4
CPNE1-219ENST00000440240 MTMR1Q13613 665 aa23.8■■□□□ 1.4
CPNE1-219ENST00000440240 COL9A3Q14050 684 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-219ENST00000440240 TOP1MTQ969P6 601 aa23.8■■□□□ 1.4
CPNE1-219ENST00000440240 LRRC2Q9BYS8 371 aa23.8■■□□□ 1.4
CPNE1-219ENST00000440240 EHMT1Q9H9B1 1298 aa23.8■■□□□ 1.4
CPNE1-219ENST00000440240 PCDHA6Q9UN73 950 aa23.8■■□□□ 1.4
CPNE1-219ENST00000440240 TELO2Q9Y4R8 837 aa23.8■■□□□ 1.4
CPNE1-219ENST00000440240 PCDHA8Q9Y5H6 950 aa23.8■■□□□ 1.4
CPNE1-219ENST00000440240 UBIAD1Q9Y5Z9 338 aa23.8■■□□□ 1.4
CPNE1-219ENST00000440240 hCG_1642624A0A1W2PR95 340 aa23.79■■□□□ 1.4
CPNE1-219ENST00000440240 TAF2Q6P1X5 1199 aa23.79■■□□□ 1.4
CPNE1-219ENST00000440240 HEATR3Q7Z4Q2 680 aa23.79■■□□□ 1.4
CPNE1-219ENST00000440240 RPAINQ86UA6 219 aa23.79■■□□□ 1.4
CPNE1-219ENST00000440240 TEX2Q8IWB9 1127 aa23.79■■□□□ 1.4
CPNE1-219ENST00000440240 SAMD11Q96NU1 681 aa23.79■■□□□ 1.4
CPNE1-219ENST00000440240 ERAP1Q9NZ08 941 aa23.79■■□□□ 1.4
CPNE1-219ENST00000440240 UBE2SQ16763 222 aa23.78■■□□□ 1.4
CPNE1-219ENST00000440240 BMP2KLQ5H9B9 411 aa23.78■■□□□ 1.4
CPNE1-219ENST00000440240 MICU3Q86XE3 530 aa23.78■■□□□ 1.4
CPNE1-219ENST00000440240 RAB11FIP4Q86YS3 637 aa23.78■■□□□ 1.4
CPNE1-219ENST00000440240 FBXO22Q8NEZ5 403 aa23.78■■□□□ 1.4
CPNE1-219ENST00000440240 SP7Q8TDD2 431 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-219ENST00000440240 NEK1Q96PY6 1258 aa23.78■■□□□ 1.4
CPNE1-219ENST00000440240 SMARCAD1Q9H4L7 1026 aa23.78■■□□□ 1.4
CPNE1-219ENST00000440240 JADE2Q9NQC1 790 aa23.78■■□□□ 1.4
CPNE1-219ENST00000440240 RBM28Q9NW13 759 aaKnown RBP23.78■■□□□ 1.4
CPNE1-219ENST00000440240 GSTTP1A0A1W2PQM5 241 aa23.77■■□□□ 1.4
CPNE1-219ENST00000440240 RSPH3Q86UC2 560 aa23.77■■□□□ 1.4
CPNE1-219ENST00000440240 GLG1Q92896 1179 aa23.77■■□□□ 1.4
CPNE1-219ENST00000440240 NECAB3Q96P71 396 aaPredicted RBP23.77■■□□□ 1.4
CPNE1-219ENST00000440240 YME1L1Q96TA2 773 aa23.77■■□□□ 1.4
CPNE1-219ENST00000440240 IFIH1Q9BYX4 1025 aaKnown RBP23.77■■□□□ 1.4
CPNE1-219ENST00000440240 UPP2O95045 317 aa23.76■■□□□ 1.39
CPNE1-219ENST00000440240 PPFIA1Q13136 1202 aa23.76■■□□□ 1.39
CPNE1-219ENST00000440240 APOA5Q6Q788 366 aa23.76■■□□□ 1.39
CPNE1-219ENST00000440240 TNPO1Q92973 898 aaKnown RBP23.76■■□□□ 1.39
CPNE1-219ENST00000440240 C17orf80Q9BSJ5 609 aa23.76■■□□□ 1.39
CPNE1-219ENST00000440240 OSBPL7Q9BZF2 842 aa23.76■■□□□ 1.39
CPNE1-219ENST00000440240 TCF20Q9UGU0 1960 aaKnown RBP23.75■■□□□ 1.39
CPNE1-219ENST00000440240 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-219ENST00000440240 FOSP01100 380 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-219ENST00000440240 CHRNA1P02708 482 aa23.75■■□□□ 1.39
CPNE1-219ENST00000440240 DHX32Q7L7V1 743 aaKnown RBP23.75■■□□□ 1.39
CPNE1-219ENST00000440240 RBAK-RBAKDNI3L0D1 243 aa23.74■■□□□ 1.39
CPNE1-219ENST00000440240 RPLP2P05387 115 aaKnown RBP23.74■■□□□ 1.39
CPNE1-219ENST00000440240 EXOSC10Q01780 885 aaKnown RBP23.74■■□□□ 1.39
CPNE1-219ENST00000440240 GRIK4Q16099 956 aa23.74■■□□□ 1.39
CPNE1-219ENST00000440240 PTPROQ16827 1216 aa23.74■■□□□ 1.39
CPNE1-219ENST00000440240 TSGA10IPQ3SY00 556 aa23.74■■□□□ 1.39
CPNE1-219ENST00000440240 EPC2Q52LR7 807 aa23.74■■□□□ 1.39
CPNE1-219ENST00000440240 MXRA8Q9BRK3 442 aa23.74■■□□□ 1.39
CPNE1-219ENST00000440240 KCNH7Q9NS40 1196 aa23.74■■□□□ 1.39
CPNE1-219ENST00000440240 PKD2L1Q9P0L9 805 aa23.74■■□□□ 1.39
CPNE1-219ENST00000440240 TUBE1Q9UJT0 475 aa23.74■■□□□ 1.39
CPNE1-219ENST00000440240 KAT6AQ92794 2004 aa23.74■■□□□ 1.39
CPNE1-219ENST00000440240 DOCK5Q9H7D0 1870 aa23.73■■□□□ 1.39
CPNE1-219ENST00000440240 MICAL3Q7RTP6 2002 aa23.73■■□□□ 1.39
CPNE1-219ENST00000440240 MBLAC1A4D2B0 266 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-219ENST00000440240 RRN3P2A6NIE6 340 aa23.73■■□□□ 1.39
CPNE1-219ENST00000440240 ZBTB43O43298 467 aa23.73■■□□□ 1.39
CPNE1-219ENST00000440240 MARK3P27448 753 aa23.73■■□□□ 1.39
CPNE1-219ENST00000440240 NAPAP54920 295 aa23.73■■□□□ 1.39
CPNE1-219ENST00000440240 PPP1R18Q6NYC8 613 aa23.73■■□□□ 1.39
CPNE1-219ENST00000440240 MRPL38Q96DV4 380 aaKnown RBP23.73■■□□□ 1.39
CPNE1-219ENST00000440240 AZI2Q9H6S1 392 aa23.73■■□□□ 1.39
CPNE1-219ENST00000440240 JPH1Q9HDC5 661 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-219ENST00000440240 RIC8AQ9NPQ8 531 aa23.73■■□□□ 1.39
CPNE1-219ENST00000440240 SLC9A2Q9UBY0 812 aa23.73■■□□□ 1.39
CPNE1-219ENST00000440240 V9GY48 417 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-219ENST00000440240 BRWD1Q9NSI6 2320 aa23.73■■□□□ 1.39
CPNE1-219ENST00000440240 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-219ENST00000440240 hCG_1984214I3L0E3 225 aa23.72■■□□□ 1.39
CPNE1-219ENST00000440240 COL9A1P20849 921 aa23.72■■□□□ 1.39
CPNE1-219ENST00000440240 KRT32Q14532 448 aa23.72■■□□□ 1.39
CPNE1-219ENST00000440240 RTN1Q16799 776 aa23.72■■□□□ 1.39
CPNE1-219ENST00000440240 WWC2Q6AWC2 1192 aa23.72■■□□□ 1.39
CPNE1-219ENST00000440240 RUFY4Q6ZNE9 571 aa23.72■■□□□ 1.39
CPNE1-219ENST00000440240 CENPQQ7L2Z9 268 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-219ENST00000440240 ZNF713Q8N859 430 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-219ENST00000440240 SDF4Q9BRK5 362 aa23.72■■□□□ 1.39
CPNE1-219ENST00000440240 C1QTNF1Q9BXJ1 281 aa23.72■■□□□ 1.39
CPNE1-219ENST00000440240 GLT8D2Q9H1C3 349 aa23.72■■□□□ 1.39
CPNE1-219ENST00000440240 CNTNAP5Q8WYK1 1306 aa23.71■■□□□ 1.39
CPNE1-219ENST00000440240 H3BNC9 293 aa23.71■■□□□ 1.39
CPNE1-219ENST00000440240 GHRP10912 638 aa23.71■■□□□ 1.39
CPNE1-219ENST00000440240 MARCH8Q5T0T0 291 aa23.71■■□□□ 1.39
CPNE1-219ENST00000440240 TMEM192Q8IY95 271 aa23.71■■□□□ 1.39
CPNE1-219ENST00000440240 DNAJB3Q8WWF6 145 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms