RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 FRMPD2Q68DX3 1309 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 KLF18A0A0U1RQI7 1052 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 RBM47A0AV96 593 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 EFSO43281 561 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 ZBTB43O43298 467 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 FLOT1O75955 427 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 PARP1P09874 1014 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 SCP2P22307 547 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 PAX3P23760 479 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 HOXA7P31268 230 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 COPB2P35606 906 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 GNAQP50148 359 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 SFSWAPQ12872 951 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 DGKZQ13574 1117 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 LAMC2Q13753 1193 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 ASPRV1Q53RT3 343 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 FAM83BQ5T0W9 1011 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 GPATCH4Q5T3I0 446 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 RCSD1Q6JBY9 416 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 FAM160B2Q86V87 743 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 ZNF654Q8IZM8 581 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 GOLGA6L1Q8N7Z2 621 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 GTF3C2Q8WUA4 911 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 LY9Q9HBG7 655 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 BRD7Q9NPI1 651 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 HOXC10Q9NYD6 342 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 FEM1BQ9UK73 627 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 SLC45A1Q9Y2W3 748 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 COMMD10Q9Y6G5 202 aa7.11□□□□□ -1.27
ECHDC1-208ENST00000436638 CCDC196A0A1B0GTZ2 297 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 GOLGA8AA7E2F4 631 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 GOLGA8BA8MQT2 603 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 TMEM232C9JQI7 657 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 OIP5O43482 229 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 ZBED4O75132 1171 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 PDHBP11177 359 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 MCM2P49736 904 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 METAP2P50579 478 aaKnown RBP eCLIP7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 STAT2P52630 851 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 AK2P54819 239 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 APOBRQ0VD83 1088 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 MTA1Q13330 715 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 COG2Q14746 738 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 GRM4Q14833 912 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 GRIN2CQ14957 1233 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 TREML2Q5T2D2 321 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 GPAT2Q6NUI2 795 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 CPLX2Q6PUV4 134 aaKnown RBP7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 CATSPERGQ6ZRH7 1159 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 KCTD1Q719H9 257 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 GET4Q7L5D6 327 aaPredicted RBP7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 SGMS1Q86VZ5 419 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 MICU3Q86XE3 530 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 CREBRFQ8IUR6 639 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 CCAR1Q8IX12 1150 aaKnown RBP7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 FAM43AQ8N2R8 423 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 SNRNP27Q8WVK2 155 aaKnown RBP7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 EDARADDQ8WWZ3 215 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 IL17RAQ96F46 866 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 NUP88Q99567 741 aaPredicted RBP7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 SPOCK3Q9BQ16 436 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 SLF1Q9BQI6 1058 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 ASCC2Q9H1I8 757 aaPredicted RBP7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 SLKQ9H2G2 1235 aaPredicted RBP7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 RBM28Q9NW13 759 aaKnown RBP7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 TMEM51Q9NW97 253 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 KLK14Q9P0G3 267 aa7.1□□□□□ -1.27
ECHDC1-208ENST00000436638 GREB1LQ9C091 1923 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 MYPNQ86TC9 1320 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 KLRF2D3W0D1 207 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 IGF2BP3O00425 579 aaKnown RBP eCLIP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 CPLX1O14810 134 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 CA12O43570 354 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 ZNF500O60304 480 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 TRPA1O75762 1119 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 GOLGA8HP0CJ92 632 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 ARAFP10398 606 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 RXRAP19793 462 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 SLC16A2P36021 539 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 GCLCP48506 637 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 RCAN1P53805 252 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 PCBP4P57723 403 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 HERVK_113P62684 666 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 AKAP17AQ02040 695 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 ZNF543Q08ER8 600 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 PPP2R5BQ15173 497 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 ZRSR2Q15696 482 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 KIAA1755Q5JYT7 1200 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 SYDE2Q5VT97 1194 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 APOA5Q6Q788 366 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 C1orf229Q6ZS94 237 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 BTLAQ7Z6A9 289 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 RAB11FIP4Q86YS3 637 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 CCDC144CPQ8IYA2 1237 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 FBXL16Q8N461 479 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 PRPF38AQ8NAV1 312 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 FANCBQ8NB91 859 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 ZSCAN31Q96LW9 406 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 MAP3K14Q99558 947 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 PTPN18Q99952 460 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms