RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 PFASO15067 1338 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 PALM3A6NDB9 673 aaPredicted RBP11.65□□□□□ -0.54
NOD1-206ENST00000434755 CXCL11O14625 94 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 STAM2O75886 525 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 ARHGAP4P98171 946 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 PTPAQ15257 358 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 TAF12Q16514 161 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 SFMBT2Q5VUG0 894 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 OXER1Q8TDS5 423 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 IFT81Q8WYA0 676 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 NOX5Q96PH1 765 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 TUBGCP2Q9BSJ2 902 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 CCDC94Q9BW85 323 aaPredicted RBP11.65□□□□□ -0.54
NOD1-206ENST00000434755 TMEM39BQ9GZU3 492 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
NOD1-206ENST00000434755 SPOPO43791 374 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 CASP1P29466 404 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 KLHL30Q0D2K2 578 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 GSTA5Q7RTV2 222 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 LDHDQ86WU2 507 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 DHX40Q8IX18 779 aaKnown RBP11.65□□□□□ -0.54
NOD1-206ENST00000434755 MSANTD4Q8NCY6 345 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 SECISBP2LQ93073 1101 aaKnown RBP11.65□□□□□ -0.54
NOD1-206ENST00000434755 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 PKNOX2Q96KN3 472 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 RMDN3Q96TC7 470 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 DESI2Q9BSY9 194 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 ARMCX3Q9UH62 379 aaPredicted RBP11.65□□□□□ -0.54
NOD1-206ENST00000434755 K7ENM7 598 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 PLCG1P19174 1290 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 TYW1BQ6NUM6 668 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 TRIM58Q8NG06 486 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
NOD1-206ENST00000434755 FAM81BQ96LP2 452 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 OGFRQ9NZT2 677 aa11.65□□□□□ -0.54
NOD1-206ENST00000434755 ZNF215Q9UL58 517 aaPredicted RBP11.65□□□□□ -0.54
NOD1-206ENST00000434755 CCDC155Q8N6L0 562 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 KIFAP3Q92845 792 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 PYCARDQ9ULZ3 195 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 FAM237AA0A1B0GTK4 181 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 GTF2A2P52657 109 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 TNNC1P63316 161 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 SREBF2Q12772 1141 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 ADAM9Q13443 819 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 CEP63Q96MT8 703 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 EDEM3Q9BZQ6 932 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 DAAM1Q9Y4D1 1078 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 EFCAB8A8MWE9 144 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 WNT10BO00744 389 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 BCRP11274 1271 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 FCER1AP12319 257 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 XRCC5P13010 732 aaKnown RBP11.64□□□□□ -0.55
NOD1-206ENST00000434755 RASSF7Q02833 373 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 MOXD1Q6UVY6 613 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 SYCE1Q8N0S2 351 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 STAG2Q8N3U4 1231 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 ANKRD13CQ8N6S4 541 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 CNOT6LQ96LI5 555 aaKnown RBP11.64□□□□□ -0.55
NOD1-206ENST00000434755 KIAA1683Q9H0B3 1180 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 GPRC5DQ9NZD1 345 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 PRR12Q9ULL5 1215 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 BAZ2BQ9UIF8 2168 aaKnown RBP11.64□□□□□ -0.55
NOD1-206ENST00000434755 FGRP09769 529 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 POLGP54098 1239 aaPredicted RBP11.64□□□□□ -0.55
NOD1-206ENST00000434755 RHBDL3P58872 404 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 ZBED6P86452 979 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 NFIAQ12857 509 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 MTMR2Q13614 643 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 CCDC25Q86WR0 208 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 GPR161Q8N6U8 529 aaKnown RBP11.64□□□□□ -0.55
NOD1-206ENST00000434755 MAF1Q9H063 256 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 PLEKHA4Q9H4M7 779 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 ST7Q9NRC1 585 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 NID2Q14112 1375 aa11.64□□□□□ -0.55
NOD1-206ENST00000434755 XIRP1Q702N8 1843 aaKnown RBP11.63□□□□□ -0.55
NOD1-206ENST00000434755 A0A1W2PQC6 194 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 TLDC2A0PJX2 215 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 WDR64B1ANS9 1081 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 GUCY1A2P33402 732 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 GCLCP48506 637 aaPredicted RBP11.63□□□□□ -0.55
NOD1-206ENST00000434755 HMGCS2P54868 508 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 RSPH3Q86UC2 560 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 SLC7A3Q8WY07 619 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 PPP1R16BQ96T49 567 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 C4BP0C0L5 1744 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 ABCA3Q99758 1704 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 KIAA0754O94854 1291 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 ABCB4P21439 1286 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 LIG4P49917 911 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 FKBP1BP68106 108 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 PPARDQ03181 441 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 TCP11X2Q5H9J9 407 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 METTL16Q86W50 562 aaKnown RBP11.63□□□□□ -0.55
NOD1-206ENST00000434755 RAVER2Q9HCJ3 691 aaKnown RBP11.63□□□□□ -0.55
NOD1-206ENST00000434755 ANKFY1Q9P2R3 1169 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 ZHX1Q9UKY1 873 aaPredicted RBP11.63□□□□□ -0.55
NOD1-206ENST00000434755 SFI1A8K8P3 1242 aa11.63□□□□□ -0.55
NOD1-206ENST00000434755 ATP8B1O43520 1251 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms