RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ADAM9Q13443 819 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 PRR16Q569H4 304 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 TDRD12Q587J7 1177 aaKnown RBP11.49□□□□□ -0.57
CD44-210ENST00000434472 FAM83BQ5T0W9 1011 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 CC2D2BQ6DHV5 1058 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 SH3BP5LQ7L8J4 393 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 KRT26Q7Z3Y9 468 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 SIAH1Q8IUQ4 282 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 GLIS3Q8NEA6 775 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 FAM71BQ8TC56 605 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 SCFD1Q8WVM8 642 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 CAPZA3Q96KX2 299 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 NOX5Q96PH1 765 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 POLR3CQ9BUI4 534 aaPredicted RBP11.49□□□□□ -0.57
CD44-210ENST00000434472 PDE11AQ9HCR9 933 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 TFR2Q9UP52 801 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 TRAF3IP3Q9Y228 551 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 SIPA1L1O43166 1804 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 ARFGEF1Q9Y6D6 1849 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 COL11A2P13942 1736 aaPredicted RBP11.49□□□□□ -0.57
CD44-210ENST00000434472 PIK3CDO00329 1044 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 PDXKO00764 312 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 NKRFO15226 690 aaKnown RBP eCLIP11.49□□□□□ -0.57
CD44-210ENST00000434472 SRGAP2O75044 1071 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 MOCS3O95396 460 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 NDUFB10O96000 172 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 GAP43P17677 238 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 RPL13P26373 211 aaKnown RBP11.49□□□□□ -0.57
CD44-210ENST00000434472 ANXA13P27216 316 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 HSPA1LP34931 641 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 PAFAH1B1P43034 410 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 SPIRE1Q08AE8 756 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 GIT2Q14161 759 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 C10orf76Q5T2E6 689 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 CATSPER3Q86XQ3 398 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 NELFCDQ8IXH7 590 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 SMCR8Q8TEV9 937 aaPredicted RBP11.49□□□□□ -0.57
CD44-210ENST00000434472 CNKSR1Q969H4 720 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 EHMT1Q9H9B1 1298 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 METTL14Q9HCE5 456 aaKnown RBP11.49□□□□□ -0.57
CD44-210ENST00000434472 TBC1D7Q9P0N9 293 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 HERC5Q9UII4 1024 aaKnown RBP11.49□□□□□ -0.57
CD44-210ENST00000434472 DUSP10Q9Y6W6 482 aa11.49□□□□□ -0.57
CD44-210ENST00000434472 FAM196BA6NMK8 535 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 H3BQF6 201 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 SLC16A3O15427 465 aaKnown RBP11.48□□□□□ -0.57
CD44-210ENST00000434472 EYA4O95677 639 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 TFRCP02786 760 aaKnown RBP11.48□□□□□ -0.57
CD44-210ENST00000434472 MUTP22033 750 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 ZNF76P36508 570 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 STAT3P40763 770 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 CACNB3P54284 484 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 ASIC2Q16515 512 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 KNOP1Q1ED39 458 aaKnown RBP11.48□□□□□ -0.57
CD44-210ENST00000434472 ARSHQ5FYA8 562 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 CCDC181Q5TID7 509 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 HGSNATQ68CP4 663 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 EPM2AIP1Q7L775 607 aaPredicted RBP11.48□□□□□ -0.57
CD44-210ENST00000434472 GJA10Q969M2 543 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 ZHX3Q9H4I2 956 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 MLXIPQ9HAP2 919 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 ARHGEF10LQ9HCE6 1279 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 PLCB1Q9NQ66 1216 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 AIPL1Q9NZN9 384 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 TMOD2Q9NZR1 351 aa11.48□□□□□ -0.57
CD44-210ENST00000434472 BZW2Q9Y6E2 419 aaKnown RBP11.48□□□□□ -0.57
CD44-210ENST00000434472 BRWD3Q6RI45 1802 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 NPHP3-ACAD11A0A0J9YXS1 232 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 A0A0U1RQG5 324 aaPredicted RBP11.47□□□□□ -0.57
CD44-210ENST00000434472 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 TBCAO75347 108 aaKnown RBP11.47□□□□□ -0.57
CD44-210ENST00000434472 NOL4O94818 638 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 GDF11O95390 407 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 AFPP02771 609 aaKnown RBP11.47□□□□□ -0.57
CD44-210ENST00000434472 POTEIP0CG38 1075 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 AARSP49588 968 aaKnown RBP eCLIP11.47□□□□□ -0.57
CD44-210ENST00000434472 POLR2FP61218 127 aaKnown RBP11.47□□□□□ -0.57
CD44-210ENST00000434472 BMT2Q1RMZ1 405 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 GLE1Q53GS7 698 aaKnown RBP11.47□□□□□ -0.57
CD44-210ENST00000434472 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 POTEEQ6S8J3 1075 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 CCNI2Q6ZMN8 369 aaPredicted RBP11.47□□□□□ -0.57
CD44-210ENST00000434472 CREG2Q8IUH2 290 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 OSBPL9Q96SU4 736 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 TUFT1Q9NNX1 390 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 ZCCHC17Q9NP64 241 aaKnown RBP11.47□□□□□ -0.57
CD44-210ENST00000434472 NLRC4Q9NPP4 1024 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 TYW1Q9NV66 732 aaKnown RBP11.47□□□□□ -0.57
CD44-210ENST00000434472 ARMCX3Q9UH62 379 aaPredicted RBP11.47□□□□□ -0.57
CD44-210ENST00000434472 HDAC9Q9UKV0 1011 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 CAPN6Q9Y6Q1 641 aa11.47□□□□□ -0.57
CD44-210ENST00000434472 BTNL10A8MVZ5 291 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 MSH4O15457 936 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 GH2P01242 217 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 SPATA31C1P0DKV0 1188 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 NR2F2P24468 414 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 TNNT3P45378 269 aaPredicted RBP11.46□□□□□ -0.57
CD44-210ENST00000434472 CACNB1Q02641 598 aaPredicted RBP11.46□□□□□ -0.57
CD44-210ENST00000434472 RASSF7Q02833 373 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 KLHL30Q0D2K2 578 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms