RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CST5P28325 142 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 GNA11P29992 359 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 PURAQ00577 322 aaKnown RBP6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 LAMC2Q13753 1193 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 HSDL1Q3SXM5 330 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 GNPTABQ3T906 1256 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 BRDTQ58F21 947 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 CELF3Q5SZQ8 465 aaKnown RBP6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 PRPF38BQ5VTL8 546 aaKnown RBP6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 MYSM1Q5VVJ2 828 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 KCNV1Q6PIU1 500 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 CYFIP1Q7L576 1253 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 ZNF713Q8N859 430 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 CYP2W1Q8TAV3 490 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 CCDC12Q8WUD4 166 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 TRIM43Q96BQ3 446 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 SPATA33Q96N06 139 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 MTG1Q9BT17 334 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 ANO3Q9BYT9 981 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 ZMYND12Q9H0C1 365 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 EHMT1Q9H9B1 1298 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 TMEM39AQ9NV64 488 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 POLR3EQ9NVU0 708 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 NID2Q14112 1375 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 GRIN2DO15399 1336 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 ELP1O95163 1332 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 A0A0U1RQG5 324 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 A6NJR5 290 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 DDX39AO00148 427 aaKnown RBP6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 ARVCFO00192 962 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 TLR3O15455 904 aaKnown RBP6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 FIBPO43427 364 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 JAK2O60674 1132 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 STAM2O75886 525 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 CDKL5O76039 1030 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 MMP3P08254 477 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 CLTBP09497 229 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 ARP10275 920 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 TGFB3P10600 412 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 FDPSP14324 419 aaKnown RBP6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 RAG1P15918 1043 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 UBA1P22314 1058 aaKnown RBP6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 ICAM3P32942 547 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 RBM25P49756 843 aaKnown RBP6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 CLK2P49760 499 aaKnown RBP6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 CDK7P50613 346 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 NKX3-2P78367 333 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 FAAP100Q0VG06 881 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 SEMA3FQ13275 785 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 MTMR1Q13613 665 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 NEDD9Q14511 834 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 SNX17Q15036 470 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 DGKDQ16760 1214 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 NBPF20Q3BBV1 942 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 KMT5BQ4FZB7 885 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 UTP14CQ5TAP6 766 aaKnown RBP6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 PPP1R18Q6NYC8 613 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 CCDC83Q8IWF9 413 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 REXO1Q8N1G1 1221 aaKnown RBP6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 CCDC148Q8NFR7 591 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 BADQ92934 168 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 GTF3C6Q969F1 213 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 IL17RAQ96F46 866 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 LBHD1Q9BQE6 289 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 MXRA8Q9BRK3 442 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 PRR14Q9BWN1 585 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 PPP1R12CQ9BZL4 782 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 GLT8D2Q9H1C3 349 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 TRPV6Q9H1D0 765 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 JADE2Q9NQC1 790 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 ORC3Q9UBD5 711 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 LIMCH1Q9UPQ0 1083 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 UBIAD1Q9Y5Z9 338 aa6.58□□□□□ -1.36
HMGB3P24-201ENST00000433260 FAM86B1E9PN63 330 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 RBAK-RBAKDNI3L0D1 243 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 NOP56O00567 594 aaKnown RBP6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 KPNA6O60684 536 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 PPFIA4O75335 1185 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 CABYRO75952 493 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 FAM86B2P0C5J1 330 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 ZNF286BP0CG31 522 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 ITGB8P26012 769 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 MAGEA10P43363 369 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 USP46P62068 366 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 ARHGAP4P98171 946 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 GUCY1B3Q02153 619 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 ST3GAL1Q11201 340 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 AP3B2Q13367 1082 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 RABEP1Q15276 862 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 CEP55Q53EZ4 464 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 C1orf53Q5VUE5 145 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 XRRA1Q6P2D8 792 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 PLA2G4DQ86XP0 818 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 BLIDQ8IZY5 108 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 NSUN7Q8NE18 718 aaKnown RBP6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 BICD2Q8TD16 824 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 TBCKQ8TEA7 893 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 KAT2BQ92831 832 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 WNT2BQ93097 391 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 GPRASP2Q96D09 838 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms