RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ZBTB43O43298 467 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 TLL1O43897 1013 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 EFCAB14O75071 495 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 ATP9AO75110 1047 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 LGR5O75473 907 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 HMGB1P09429 215 aaKnown RBP10.82□□□□□ -0.68
NUP50-205ENST00000419387 ITGB5P18084 799 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 SP4Q02446 784 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 TAP1Q03518 808 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 MBTPS1Q14703 1052 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 CCDC85BQ15834 202 aaPredicted RBP10.82□□□□□ -0.68
NUP50-205ENST00000419387 RTN1Q16799 776 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 TCTN1Q2MV58 587 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 SEPT1Q8WYJ6 367 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 SYMPKQ92797 1274 aaKnown RBP10.82□□□□□ -0.68
NUP50-205ENST00000419387 ZBED2Q9BTP6 218 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 EHMT1Q9H9B1 1298 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 CERS4Q9HA82 394 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 PRDM6Q9NQX0 595 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 SETD4Q9NVD3 440 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 ZNF215Q9UL58 517 aaPredicted RBP10.82□□□□□ -0.68
NUP50-205ENST00000419387 TELO2Q9Y4R8 837 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 V9GY48 417 aaPredicted RBP10.82□□□□□ -0.68
NUP50-205ENST00000419387 EMSYQ7Z589 1322 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 CNTNAP5Q8WYK1 1306 aa10.82□□□□□ -0.68
NUP50-205ENST00000419387 A0A0C4DFX4 3053 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 RFXAPO00287 272 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 ARHGEF15O94989 841 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 KCNA2P16389 499 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 POU3F3P20264 500 aaPredicted RBP10.81□□□□□ -0.68
NUP50-205ENST00000419387 TCF7P36402 384 aaPredicted RBP10.81□□□□□ -0.68
NUP50-205ENST00000419387 NAPAP54920 295 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 ADAM17P78536 824 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 DEFB103AP81534 67 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 FUT2Q10981 343 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 TJAP1Q5JTD0 557 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 WWC2Q6AWC2 1192 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 TRIM50Q86XT4 487 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 TEX2Q8IWB9 1127 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 DBF4BQ8NFT6 615 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 ATXN2LQ8WWM7 1075 aaKnown RBP10.81□□□□□ -0.68
NUP50-205ENST00000419387 KCNB2Q92953 911 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 RIC8AQ9NPQ8 531 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 JADE2Q9NQC1 790 aa10.81□□□□□ -0.68
NUP50-205ENST00000419387 FAM217BQ9NTX9 383 aaPredicted RBP10.81□□□□□ -0.68
NUP50-205ENST00000419387 KLF18A0A0U1RQI7 1052 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 GSTTP1A0A1W2PQM5 241 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 EPOPA6NHQ4 379 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 GOLGA8AA7E2F4 631 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 GOLGA8BA8MQT2 603 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 hCG_1984214I3L0E3 225 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 GTPBP6O43824 516 aaPredicted RBP10.8□□□□□ -0.68
NUP50-205ENST00000419387 CAND2O75155 1236 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 GJB5O95377 273 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 FOSP01100 380 aaPredicted RBP10.8□□□□□ -0.68
NUP50-205ENST00000419387 CDC27P30260 824 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 RCAN1P53805 252 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 ARHGAP4P98171 946 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 MTMR1Q13613 665 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 PLEKHG4Q58EX7 1191 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 TYW1BQ6NUM6 668 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 PPP1R18Q6NYC8 613 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 TMCO2Q7Z6W1 182 aaPredicted RBP10.8□□□□□ -0.68
NUP50-205ENST00000419387 MICALL1Q8N3F8 863 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 ZNF713Q8N859 430 aaPredicted RBP10.8□□□□□ -0.68
NUP50-205ENST00000419387 ARNTL2Q8WYA1 636 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 RAD9AQ99638 391 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 MXRA8Q9BRK3 442 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 THEGQ9P2T0 379 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 MTCH2Q9Y6C9 303 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 UNC80Q8N2C7 3258 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 NRCAMQ92823 1304 aa10.8□□□□□ -0.68
NUP50-205ENST00000419387 LCHNA4D1U4 455 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 SMCO2A6NFE2 343 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 STXBP3O00186 592 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 HSPA4P34932 840 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 ADD1P35611 737 aaKnown RBP10.79□□□□□ -0.68
NUP50-205ENST00000419387 ADCY7P51828 1080 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 MRPS5P82675 430 aaKnown RBP10.79□□□□□ -0.68
NUP50-205ENST00000419387 FGD1P98174 961 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 FAM26DQ5JW98 314 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.79□□□□□ -0.68
NUP50-205ENST00000419387 Q6ZUG5 572 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 LMBR1Q8WVP7 490 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 FAM212AQ96EL1 285 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 GLT8D2Q9H1C3 349 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 SMARCAD1Q9H4L7 1026 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 KCNH7Q9NS40 1196 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 BARHL2Q9NY43 387 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 ERAP1Q9NZ08 941 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 PKD2L1Q9P0L9 805 aa10.79□□□□□ -0.68
NUP50-205ENST00000419387 NAP1L2Q9ULW6 460 aaPredicted RBP10.79□□□□□ -0.68
NUP50-205ENST00000419387 DOCK5Q9H7D0 1870 aa10.78□□□□□ -0.68
NUP50-205ENST00000419387 EYSQ5T1H1 3165 aa10.78□□□□□ -0.68
NUP50-205ENST00000419387 CHD9Q3L8U1 2897 aa10.78□□□□□ -0.68
NUP50-205ENST00000419387 CCDC196A0A1B0GTZ2 297 aa10.78□□□□□ -0.68
NUP50-205ENST00000419387 RBAK-RBAKDNI3L0D1 243 aa10.78□□□□□ -0.68
NUP50-205ENST00000419387 AMHP03971 560 aa10.78□□□□□ -0.68
NUP50-205ENST00000419387 CTSHP09668 335 aa10.78□□□□□ -0.68
NUP50-205ENST00000419387 CPA1P15085 419 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms