RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 SYCP2LQ5T4T6 812 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 IP6K1Q92551 441 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 C14orf93Q9H972 538 aaKnown RBP19.92■□□□□ 0.78
SHANK3-202ENST00000414786 NPATQ14207 1427 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 NDUFB5O43674 189 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 CDC25AP30304 524 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 ERLEC1Q96DZ1 483 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 TSKSQ9UJT2 592 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 PFKFB1P16118 471 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 LRRC24Q50LG9 513 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 TNKSO95271 1327 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 KDM2BQ8NHM5 1336 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 C21orf2O43822 256 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 NDUFAF2Q8N183 169 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 ZNF341Q9BYN7 854 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 IREB2P48200 963 aaKnown RBP19.91■□□□□ 0.78
SHANK3-202ENST00000414786 PTGDRQ13258 359 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 SIX5Q8N196 739 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 FAM133AQ8N9E0 248 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 ZBTB12Q9Y330 459 aaPredicted RBP19.91■□□□□ 0.78
SHANK3-202ENST00000414786 NR2F2P24468 414 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 ARIH2O95376 493 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 HMBSP08397 361 aa19.91■□□□□ 0.78
SHANK3-202ENST00000414786 FTCDO95954 541 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 ULK4Q96C45 1275 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 ADD3Q9UEY8 706 aaKnown RBP19.9■□□□□ 0.78
SHANK3-202ENST00000414786 HYOU1Q9Y4L1 999 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 FLT4P35916 1363 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 SYCE1LA8MT33 242 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 CHEK2O96017 543 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 KLC3Q6P597 504 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 VAMP4O75379 141 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 CAPZA2P47755 286 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 KRT26Q7Z3Y9 468 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 FAF2Q96CS3 445 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 USP28Q96RU2 1077 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 SIK2Q9H0K1 926 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 ZNF233A6NK53 670 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 GSPT1P15170 499 aaKnown RBP19.9■□□□□ 0.78
SHANK3-202ENST00000414786 NBPF20Q3BBV1 942 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 NBPF10Q6P3W6 841 aaKnown RBP19.9■□□□□ 0.78
SHANK3-202ENST00000414786 CNOT6LQ96LI5 555 aaKnown RBP19.9■□□□□ 0.78
SHANK3-202ENST00000414786 ANGPT1Q15389 498 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 GSDMAQ96QA5 445 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 KCNG1Q9UIX4 513 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 CPB1P15086 417 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 LRRC74AQ0VAA2 488 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 RASEFQ8IZ41 740 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 ARHGAP18Q8N392 663 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 TPCN1Q9ULQ1 816 aa19.9■□□□□ 0.78
SHANK3-202ENST00000414786 DNAJC8O75937 253 aaPredicted RBP19.89■□□□□ 0.78
SHANK3-202ENST00000414786 DALRD3Q5D0E6 543 aaKnown RBP19.89■□□□□ 0.78
SHANK3-202ENST00000414786 FAM196AQ6ZSG2 479 aa19.89■□□□□ 0.78
SHANK3-202ENST00000414786 RFX8Q6ZV50 586 aa19.89■□□□□ 0.78
SHANK3-202ENST00000414786 GRAMD1CQ8IYS0 662 aa19.89■□□□□ 0.78
SHANK3-202ENST00000414786 USP19O94966 1318 aa19.89■□□□□ 0.78
SHANK3-202ENST00000414786 MT-ND3P03897 115 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 RNF168Q8IYW5 571 aaPredicted RBP19.89■□□□□ 0.77
SHANK3-202ENST00000414786 CLIC4Q9Y696 253 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 STAT2P52630 851 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 STXBP2Q15833 593 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 CIITAP33076 1130 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 AP1M1Q9BXS5 423 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 CC2D2BQ6DHV5 1058 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 CHMP1BQ7LBR1 199 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 SLC17A8Q8NDX2 589 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 TCP11Q8WWU5 503 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 MSTO1Q9BUK6 570 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 TMEM106CQ9BVX2 250 aa19.89■□□□□ 0.77
SHANK3-202ENST00000414786 EFCAB8A8MWE9 144 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 IFNA8P32881 189 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 KIAA1755Q5JYT7 1200 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 KBTBD3Q8NAB2 608 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 LBHD1Q9BQE6 289 aaPredicted RBP19.88■□□□□ 0.77
SHANK3-202ENST00000414786 KLHL8Q9P2G9 620 aaPredicted RBP19.88■□□□□ 0.77
SHANK3-202ENST00000414786 RIMS2Q9UQ26 1411 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 SRGAP2O75044 1071 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 CC2D1AQ6P1N0 951 aaPredicted RBP19.88■□□□□ 0.77
SHANK3-202ENST00000414786 BHMTQ93088 406 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 INTS9Q9NV88 658 aaKnown RBP19.88■□□□□ 0.77
SHANK3-202ENST00000414786 ARL13BQ3SXY8 428 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 USP17L2Q6R6M4 530 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 TRIM58Q8NG06 486 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 CAPS2Q9BXY5 557 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 ZBED1O96006 694 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 AFPP02771 609 aaKnown RBP19.88■□□□□ 0.77
SHANK3-202ENST00000414786 STRIP2Q9ULQ0 834 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 KCNQ3O43525 872 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 IFT88Q13099 833 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 AARS2Q5JTZ9 985 aaKnown RBP19.88■□□□□ 0.77
SHANK3-202ENST00000414786 FAM26FQ5R3K3 315 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 CROCCP2Q86T23 111 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 URGCPQ8TCY9 931 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 ACCSQ96QU6 501 aa19.88■□□□□ 0.77
SHANK3-202ENST00000414786 H2AFZP0C0S5 128 aa19.87■□□□□ 0.77
SHANK3-202ENST00000414786 CCDC159P0C7I6 412 aa19.87■□□□□ 0.77
SHANK3-202ENST00000414786 SCG2P13521 617 aa19.87■□□□□ 0.77
SHANK3-202ENST00000414786 IL9RQ01113 521 aa19.87■□□□□ 0.77
SHANK3-202ENST00000414786 SLC7A5Q01650 507 aa19.87■□□□□ 0.77
SHANK3-202ENST00000414786 H2AFVQ71UI9 128 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms