RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 FBF1Q8TES7 1133 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 MTA3Q9BTC8 594 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 FLT1P17948 1338 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 DYNC1I1O14576 645 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 CLIC2O15247 247 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 MAPK6Q16659 721 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 QRICH1Q2TAL8 776 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 MAP7D3Q8IWC1 876 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 MRRFQ96E11 262 aaKnown RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 BHMT2Q9H2M3 363 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 SLC38A10Q9HBR0 1119 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 LRRC4Q9HBW1 653 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 KDM4FA0A1W2PPD8 638 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 GMNNO75496 209 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 AKR1B1P15121 316 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 ECE1P42892 770 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 FKBP3Q00688 224 aaKnown RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 NKX1-1Q15270 411 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 ATG9AQ7Z3C6 839 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 P2RX5Q93086 422 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 MTIF3Q9H2K0 278 aaKnown RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 PFDN4Q9NQP4 134 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 MXI1P50539 228 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 TGFB2P61812 414 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 COL23A1Q86Y22 540 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 PSMB7Q99436 277 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 MTRQ99707 1265 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 LBHD1Q9BQE6 289 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 RBSNQ9H1K0 784 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 CCL15-CCL14A0A0B4J2E2 113 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 GSG1L2A8MUP6 293 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 SLFN14P0C7P3 912 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 EEF1GP26641 437 aaKnown RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 ARHGAP4P98171 946 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 CCL15Q16663 113 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 RABL6Q3YEC7 729 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 SLFNL1Q499Z3 407 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 RYBPQ8N488 228 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 NEDD1Q8NHV4 660 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 RNF139Q8WU17 664 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 ATRIPQ8WXE1 791 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 TUBGCP2Q9BSJ2 902 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 POLIQ9UNA4 740 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 CUL4BQ13620 913 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 NECTIN1Q15223 517 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 LRRC41Q15345 812 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 MB21D1Q8N884 522 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 OR6J1Q8NGC5 347 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 PIGOQ8TEQ8 1089 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 PSPC1Q8WXF1 523 aaKnown RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 EEF2KMTQ96G04 330 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 TIGD1Q96MW7 591 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 STK36Q9NRP7 1315 aa5.42□□□□□ -1.54
HDAC9-204ENST00000406451 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 V9GYY5 206 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-204ENST00000406451 KRT10P13645 584 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 ADKP55263 362 aaKnown RBP5.41□□□□□ -1.54
HDAC9-204ENST00000406451 PEX3P56589 373 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 LONRF2Q1L5Z9 754 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 C12orf60Q5U649 245 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 C4orf50Q6ZRC1 276 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 KLHL7Q8IXQ5 586 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 THEM5Q8N1Q8 247 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 ARFGAP2Q8N6H7 521 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 CPVLQ9H3G5 476 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 EMILIN3Q9NT22 766 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 CPSF3Q9UKF6 684 aaKnown RBP5.41□□□□□ -1.54
HDAC9-204ENST00000406451 PCDHB6Q9Y5E3 794 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 PPP2R5CQ13362 524 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 PPP2R5EQ16537 467 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 CDC42EP5Q6NZY7 148 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 C1orf228Q6PIY5 440 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 FAM20AQ96MK3 541 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 LY9Q9HBG7 655 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 LDHAP00338 332 aaKnown RBP5.41□□□□□ -1.54
HDAC9-204ENST00000406451 H2AFZP0C0S5 128 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 TKFCQ3LXA3 575 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 ZNF658Q5TYW1 1059 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-204ENST00000406451 H2AFVQ71UI9 128 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 CYB5R4Q7L1T6 521 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 LDHDQ86WU2 507 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 TRIM58Q8NG06 486 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 TNS2Q63HR2 1409 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 COPB1P53618 953 aaKnown RBP5.41□□□□□ -1.54
HDAC9-204ENST00000406451 PRPSAP1Q14558 356 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 SCARA5Q6ZMJ2 495 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 NEK9Q8TD19 979 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 GRK7Q8WTQ7 553 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 TMEM39BQ9GZU3 492 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 RAB17Q9H0T7 212 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 DEFB129Q9H1M3 183 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 IPO11Q9UI26 975 aaKnown RBP5.41□□□□□ -1.54
HDAC9-204ENST00000406451 SLC8A2Q9UPR5 921 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 SRPRBQ9Y5M8 271 aaKnown RBP5.41□□□□□ -1.54
HDAC9-204ENST00000406451 IPO5O00410 1097 aaKnown RBP5.41□□□□□ -1.54
HDAC9-204ENST00000406451 PPP4R3CPQ6ZMV5 832 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 FAM151AQ8WW52 585 aa5.41□□□□□ -1.54
HDAC9-204ENST00000406451 GCOM2Q9BZD3 368 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms