RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MFSD5Q6N075 450 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 SAMD3Q8N6K7 520 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 SCLYQ96I15 445 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 PGBD1Q96JS3 809 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 RNPC3Q96LT9 517 aaKnown RBP6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 SPATA33Q96N06 139 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 ALG1Q9BT22 464 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 NOC4LQ9BVI4 516 aaKnown RBP6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 USP26Q9BXU7 913 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 UPF3BQ9BZI7 483 aaKnown RBP6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 WNT8AQ9H1J5 351 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 HIPK3Q9H422 1215 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 PSTPIP2Q9H939 334 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 NCOA5Q9HCD5 579 aaKnown RBP6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 RBM28Q9NW13 759 aaKnown RBP6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 TELO2Q9Y4R8 837 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 CUL9Q8IWT3 2517 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 SCN5AQ14524 2016 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 TRIP12Q14669 1992 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 STXBP3O00186 592 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 PIK3CDO00329 1044 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 ADAMTS3O15072 1205 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 GFRA3O60609 400 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 KPNA6O60684 536 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 DTNBO60941 627 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 CFHP08603 1231 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 NAPAP54920 295 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 CCT2P78371 535 aaKnown RBP6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 SP4Q02446 784 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 PPIGQ13427 754 aaKnown RBP eCLIP6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 LAMC2Q13753 1193 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 DGKDQ16760 1214 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 GNPTABQ3T906 1256 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 TMEM240Q5SV17 173 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 CELF3Q5SZQ8 465 aaKnown RBP6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 ERICH6BQ5W0A0 696 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 PCNX4Q63HM2 1172 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 SMYD5Q6GMV2 418 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 FAM109BQ6ICB4 259 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 GDF6Q6KF10 455 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 ZNF365Q70YC5 407 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 CYFIP1Q7L576 1253 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 METTL3Q86U44 580 aaKnown RBP6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 TMEM199Q8N511 208 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 DEFB123Q8N688 67 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 PHKBQ93100 1093 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 EMID1Q96A84 441 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 FAM161BQ96MY7 647 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 INPP4AQ96PE3 977 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 MLXIPQ9HAP2 919 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 TMEM260Q9NX78 707 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 PKD2L1Q9P0L9 805 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 HDAC6Q9UBN7 1215 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 PCDHA6Q9UN73 950 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 PCDHA8Q9Y5H6 950 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 TET1Q8NFU7 2136 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 CHD9Q3L8U1 2897 aa6.62□□□□□ -1.35
HMGB1P20-201ENST00000402555 SMCO2A6NFE2 343 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 SPDYE3A6NKU9 549 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 GRXCR1A8MXD5 290 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 SPATA31C2B4DYI2 1134 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 LCE2BO14633 110 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 FIBPO43427 364 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 ATP9AO75110 1047 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 F2P00734 622 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 HOXD8P13378 290 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 ITGB5P18084 799 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 PSMA5P28066 241 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 PDIA3P30101 505 aaKnown RBP6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 ICAM3P32942 547 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 ADCY7P51828 1080 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 RCAN1P53805 252 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 ZNF200P98182 395 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 TOB2Q14106 344 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 PTGISQ16647 500 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 KIAA0753Q2KHM9 967 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 UTP14CQ5TAP6 766 aaKnown RBP6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 NFRKBQ6P4R8 1299 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 KCNV1Q6PIU1 500 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 RUFY3Q7L099 469 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 DEFB128Q7Z7B8 93 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 TRIM50Q86XT4 487 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 PPTC7Q8NI37 304 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 VWCEQ96DN2 955 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 CTAGE1Q96RT6 745 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 SEZ6LQ9BYH1 1024 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 AGXT2Q9BYV1 514 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 IL23AQ9NPF7 189 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 RIC8AQ9NPQ8 531 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 BARHL2Q9NY43 387 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 CXXC1Q9P0U4 656 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 NOD1Q9Y239 953 aa6.61□□□□□ -1.35
HMGB1P20-201ENST00000402555 NID2Q14112 1375 aa6.6□□□□□ -1.35
HMGB1P20-201ENST00000402555 COL6A3P12111 3177 aa6.6□□□□□ -1.35
HMGB1P20-201ENST00000402555 RNF223E7ERA6 249 aa6.6□□□□□ -1.35
HMGB1P20-201ENST00000402555 HAS3O00219 553 aa6.6□□□□□ -1.35
HMGB1P20-201ENST00000402555 NOP56O00567 594 aaKnown RBP6.6□□□□□ -1.35
HMGB1P20-201ENST00000402555 NRG2O14511 850 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P20-201ENST00000402555 TLL1O43897 1013 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms