RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 AMIGO3Q86WK7 504 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 SEPT12Q8IYM1 358 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 GUF1Q8N442 669 aaKnown RBP5.4□□□□□ -1.54
SMAD4-202ENST00000398417 BHMT2Q9H2M3 363 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 RIMS1Q86UR5 1692 aaKnown RBP5.4□□□□□ -1.54
SMAD4-202ENST00000398417 CNTNAP4Q9C0A0 1308 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 POTEFA5A3E0 1075 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 LRRC10BA6NIK2 292 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 MAP2K7O14733 419 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 POTEIP0CG38 1075 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 STAT1P42224 750 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 WDR59Q6PJI9 974 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 POTEGQ6S5H5 508 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 POTEEQ6S8J3 1075 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 CTNNBL1Q8WYA6 563 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-202ENST00000398417 RPGRIP1Q96KN7 1286 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 MMTAG2Q9BU76 263 aaKnown RBP5.4□□□□□ -1.54
SMAD4-202ENST00000398417 EHMT1Q9H9B1 1298 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 KBTBD4Q9NVX7 518 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 ARMCX3Q9UH62 379 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-202ENST00000398417 ZBTB5O15062 677 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 BBOX1O75936 387 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 MYCLP12524 364 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-202ENST00000398417 EXOC3L4Q17RC7 722 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 TTC31Q49AM3 519 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-202ENST00000398417 DAAM2Q86T65 1068 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 ZFPM1Q8IX07 1006 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 KIAA0895Q8NCT3 520 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 BCAS4Q8TDM0 211 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 COA1Q9GZY4 146 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 RBM12Q9NTZ6 932 aaKnown RBP5.4□□□□□ -1.54
SMAD4-202ENST00000398417 SNX12Q9UMY4 172 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 EPHB4P54760 987 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 ZNF211Q13398 564 aaPredicted RBP5.4□□□□□ -1.55
SMAD4-202ENST00000398417 RC3H1Q5TC82 1133 aaKnown RBP5.4□□□□□ -1.55
SMAD4-202ENST00000398417 PAPD7Q5XG87 772 aaKnown RBP5.4□□□□□ -1.55
SMAD4-202ENST00000398417 SHQ1Q6PI26 577 aaKnown RBP5.4□□□□□ -1.55
SMAD4-202ENST00000398417 MIER3Q7Z3K6 550 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 PIGOQ8TEQ8 1089 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 PPP1R14AQ96A00 147 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 FGFBP2Q9BYJ0 223 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 KDM3AQ9Y4C1 1321 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 RPL13P26373 211 aaKnown RBP5.4□□□□□ -1.55
SMAD4-202ENST00000398417 KLRC1P26715 233 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 RHBDL3P58872 404 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 PPM1EQ8WY54 764 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 OSBPL9Q96SU4 736 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 ZMYND12Q9H0C1 365 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 HOMER2Q9NSB8 354 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 DNAJC12Q9UKB3 198 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 PLEKHG2Q9H7P9 1386 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 PDHBP11177 359 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 TM4SF1P30408 202 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 DCCP43146 1447 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 ABCB5Q2M3G0 1257 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 MMGT1Q8N4V1 131 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 PACSIN1Q9BY11 444 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 PPANQ9NQ55 473 aaKnown RBP5.4□□□□□ -1.55
SMAD4-202ENST00000398417 SERPINB13Q9UIV8 391 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 TSKSQ9UJT2 592 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 RAB21Q9UL25 225 aa5.4□□□□□ -1.55
SMAD4-202ENST00000398417 NOVA2Q9UNW9 492 aaKnown RBP5.4□□□□□ -1.55
SMAD4-202ENST00000398417 EBAG9O00559 213 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 LLGL1Q15334 1064 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 PEX26Q7Z412 305 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 SH2D3CQ8N5H7 860 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 MTMR9Q96QG7 549 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 KCNQ5Q9NR82 932 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 FAM184BQ9ULE4 1060 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 ATRNO75882 1429 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 ARHGEF35A5YM69 484 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 NDUFAB1O14561 156 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 AMPD2Q01433 879 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 SF3B2Q13435 895 aaKnown RBP5.39□□□□□ -1.55
SMAD4-202ENST00000398417 DDX42Q86XP3 938 aaKnown RBP eCLIP5.39□□□□□ -1.55
SMAD4-202ENST00000398417 CERS3Q8IU89 383 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 CPXCR1Q8N123 301 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 EHD4Q9H223 541 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 ATP6V0A2Q9Y487 856 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 GCOM1H8Y6P7 765 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-202ENST00000398417 KRIT1O00522 736 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 POLR2MP0CAP2 368 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 NFIAQ12857 509 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 FAM186BQ8IYM0 893 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 IQCDQ96DY2 449 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 DMGDHQ9UI17 866 aaKnown RBP5.39□□□□□ -1.55
SMAD4-202ENST00000398417 JRKLQ9Y4A0 524 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 CCDC169A6NNP5 214 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 BACH1O14867 736 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 COPB2P35606 906 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 CARSP49589 748 aaKnown RBP5.39□□□□□ -1.55
SMAD4-202ENST00000398417 ARHGAP4P98171 946 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 TNIP1Q15025 636 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 GBP6Q6ZN66 633 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 STXBP4Q6ZWJ1 553 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 HS2ST1Q7LGA3 356 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 AMNQ9BXJ7 453 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 DDX47Q9H0S4 455 aaKnown RBP5.39□□□□□ -1.55
SMAD4-202ENST00000398417 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.39□□□□□ -1.55
SMAD4-202ENST00000398417 RGL1Q9NZL6 768 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms