RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 ACTN1P12814 892 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 ANKS1AQ92625 1134 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 GPR101Q96P66 508 aaPredicted RBP16.12■□□□□ 0.17
CCNF-202ENST00000397066 NYXQ9GZU5 481 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 EMILIN3Q9NT22 766 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 NPHP3-ACAD11A0A0J9YXS1 232 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 FLOT1O75955 427 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 HSD17B3P37058 310 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 CUL1Q13616 776 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 ADAT2Q7Z6V5 191 aaKnown RBP16.12■□□□□ 0.17
CCNF-202ENST00000397066 UTP11Q9Y3A2 253 aaKnown RBP16.12■□□□□ 0.17
CCNF-202ENST00000397066 GMNCA6NCL1 334 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 FAM107AO95990 144 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 KCNH2Q12809 1159 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 MTMR3Q13615 1198 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 TPTE2Q6XPS3 522 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 SELENOSQ9BQE4 189 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 CCDC113Q9H0I3 377 aa16.12■□□□□ 0.17
CCNF-202ENST00000397066 GEMIN8Q9NWZ8 242 aaKnown RBP16.12■□□□□ 0.17
CCNF-202ENST00000397066 ARMCX3Q9UH62 379 aaPredicted RBP16.12■□□□□ 0.17
CCNF-202ENST00000397066 TLR2O60603 784 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 ALKBH5Q6P6C2 394 aaKnown RBP16.11■□□□□ 0.17
CCNF-202ENST00000397066 ZNF804AQ7Z570 1209 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 CACNA2D3Q8IZS8 1091 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 CNPY4Q8N129 248 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 PBKQ96KB5 322 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 FBXL5Q9UKA1 691 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 SART1O43290 800 aaKnown RBP16.11■□□□□ 0.17
CCNF-202ENST00000397066 KIF4AO95239 1232 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 NF2P35240 595 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 FXR2P51116 673 aaKnown RBP eCLIP16.11■□□□□ 0.17
CCNF-202ENST00000397066 DHX9Q08211 1270 aaKnown RBP16.11■□□□□ 0.17
CCNF-202ENST00000397066 CLEC4GQ6UXB4 293 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 U2AF1L4Q8WU68 220 aaKnown RBP16.11■□□□□ 0.17
CCNF-202ENST00000397066 NT5C3AQ9H0P0 336 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 CYFIP2Q96F07 1278 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 ISCUQ9H1K1 167 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 CD248Q9HCU0 757 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 AMACRQ9UHK6 382 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 DAPK3O43293 454 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 ERVK-9P63128 1117 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 PTK2Q05397 1052 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 EXOC3L4Q17RC7 722 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 SYN2Q92777 582 aaPredicted RBP16.11■□□□□ 0.17
CCNF-202ENST00000397066 CEP63Q96MT8 703 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 KLC4Q9NSK0 619 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 HDAC9Q9UKV0 1011 aa16.11■□□□□ 0.17
CCNF-202ENST00000397066 CICQ96RK0 1608 aaPredicted RBP16.1■□□□□ 0.17
CCNF-202ENST00000397066 PLA2G4BP0C869 781 aa16.1■□□□□ 0.17
CCNF-202ENST00000397066 MRPL12P52815 198 aaKnown RBP16.1■□□□□ 0.17
CCNF-202ENST00000397066 PDIA5Q14554 519 aa16.1■□□□□ 0.17
CCNF-202ENST00000397066 ASTE1Q2TB18 679 aaPredicted RBP16.1■□□□□ 0.17
CCNF-202ENST00000397066 TMBIM4Q9HC24 238 aa16.1■□□□□ 0.17
CCNF-202ENST00000397066 PRPF38AQ8NAV1 312 aaKnown RBP16.1■□□□□ 0.17
CCNF-202ENST00000397066 ATP8A1Q9Y2Q0 1164 aa16.1■□□□□ 0.17
CCNF-202ENST00000397066 NOC2LQ9Y3T9 749 aaKnown RBP16.1■□□□□ 0.17
CCNF-202ENST00000397066 H2AFZP0C0S5 128 aa16.1■□□□□ 0.17
CCNF-202ENST00000397066 XRCC5P13010 732 aaKnown RBP16.1■□□□□ 0.17
CCNF-202ENST00000397066 MAGOHP61326 146 aaKnown RBP16.1■□□□□ 0.17
CCNF-202ENST00000397066 ACTN3Q08043 901 aaPredicted RBP16.1■□□□□ 0.17
CCNF-202ENST00000397066 COBLL1Q53SF7 1204 aa16.1■□□□□ 0.17
CCNF-202ENST00000397066 PPP4R3AQ6IN85 833 aa16.1■□□□□ 0.17
CCNF-202ENST00000397066 KCNV1Q6PIU1 500 aa16.1■□□□□ 0.17
CCNF-202ENST00000397066 H2AFVQ71UI9 128 aa16.1■□□□□ 0.17
CCNF-202ENST00000397066 CCDC13Q8IYE1 715 aa16.1■□□□□ 0.17
CCNF-202ENST00000397066 MAGOHBQ96A72 148 aaKnown RBP16.1■□□□□ 0.17
CCNF-202ENST00000397066 NUP98P52948 1817 aa16.1■□□□□ 0.17
CCNF-202ENST00000397066 GKAP1Q5VSY0 366 aaPredicted RBP16.09■□□□□ 0.17
CCNF-202ENST00000397066 CUL5Q93034 780 aa16.09■□□□□ 0.17
CCNF-202ENST00000397066 FSBPO95073 299 aa16.09■□□□□ 0.17
CCNF-202ENST00000397066 CCDC172P0C7W6 258 aa16.09■□□□□ 0.17
CCNF-202ENST00000397066 SLC9A1P19634 815 aa16.09■□□□□ 0.17
CCNF-202ENST00000397066 HSPA9P38646 679 aaKnown RBP16.09■□□□□ 0.17
CCNF-202ENST00000397066 ITGB3BPQ13352 177 aaPredicted RBP16.09■□□□□ 0.17
CCNF-202ENST00000397066 ORC2Q13416 577 aaPredicted RBP16.09■□□□□ 0.17
CCNF-202ENST00000397066 INPP4AQ96PE3 977 aaPredicted RBP16.09■□□□□ 0.17
CCNF-202ENST00000397066 MTMR9Q96QG7 549 aa16.09■□□□□ 0.17
CCNF-202ENST00000397066 KRT13P13646 458 aa16.09■□□□□ 0.17
CCNF-202ENST00000397066 SWT1Q5T5J6 900 aaKnown RBP16.09■□□□□ 0.17
CCNF-202ENST00000397066 MSL1Q68DK7 614 aa16.09■□□□□ 0.17
CCNF-202ENST00000397066 MREGQ8N565 214 aa16.09■□□□□ 0.17
CCNF-202ENST00000397066 NEDD1Q8NHV4 660 aa16.09■□□□□ 0.17
CCNF-202ENST00000397066 PCDHGC5Q9Y5F6 944 aa16.09■□□□□ 0.17
CCNF-202ENST00000397066 KDM3AQ9Y4C1 1321 aa16.09■□□□□ 0.17
CCNF-202ENST00000397066 POTEB3A0JP26 581 aa16.08■□□□□ 0.17
CCNF-202ENST00000397066 POTECB2RU33 542 aa16.08■□□□□ 0.17
CCNF-202ENST00000397066 CHUKO15111 745 aa16.08■□□□□ 0.17
CCNF-202ENST00000397066 NOL4O94818 638 aa16.08■□□□□ 0.17
CCNF-202ENST00000397066 ABCB4P21439 1286 aa16.08■□□□□ 0.17
CCNF-202ENST00000397066 PPP2R2AP63151 447 aa16.08■□□□□ 0.17
CCNF-202ENST00000397066 POTEBQ6S5H4 581 aa16.08■□□□□ 0.17
CCNF-202ENST00000397066 TAX1BP1Q86VP1 789 aa16.08■□□□□ 0.17
CCNF-202ENST00000397066 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.08■□□□□ 0.171e-7■■■□□ 18.6
CCNF-202ENST00000397066 PLCB1Q9NQ66 1216 aa16.08■□□□□ 0.17
CCNF-202ENST00000397066 SRP68Q9UHB9 627 aaKnown RBP16.08■□□□□ 0.17
CCNF-202ENST00000397066 PAPPAQ13219 1627 aa16.08■□□□□ 0.17
CCNF-202ENST00000397066 SLC16A2P36021 539 aa16.08■□□□□ 0.16
CCNF-202ENST00000397066 SEPT2Q15019 361 aa16.08■□□□□ 0.16
CCNF-202ENST00000397066 GOLGA6L10A0A0M3HER8 536 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms