RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 SH2B2O14492 632 aaPredicted RBP12.71□□□□□ -0.37
CNIH1-202ENST00000395573 FIBPO43427 364 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 EFCAB14O75071 495 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 PLEKHA8P1O95397 391 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 SMIM10L2AP0DMW4 78 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 SMIM10L2BP0DMW5 78 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 POU3F3P20264 500 aaPredicted RBP12.71□□□□□ -0.37
CNIH1-202ENST00000395573 ICAM3P32942 547 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 GNAQP50148 359 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 SEMA3FQ13275 785 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 MBTPS1Q14703 1052 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 PCNX4Q63HM2 1172 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 KRT40Q6A162 431 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 USP17L6PQ6QN14 398 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 METTL7BQ6UX53 244 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 SERINC5Q86VE9 423 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 TMTC2Q8N394 836 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 ADAMTS19Q8TE59 1207 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 TMEM87BQ96K49 555 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 LZTS2Q9BRK4 669 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 ESYT1Q9BSJ8 1104 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 USP26Q9BXU7 913 aa12.71□□□□□ -0.37
CNIH1-202ENST00000395573 LSG1Q9H089 658 aaKnown RBP12.71□□□□□ -0.37
CNIH1-202ENST00000395573 TTC3P53804 2025 aa12.71□□□□□ -0.38
CNIH1-202ENST00000395573 RSPH10B2B2RC85 870 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 SPATA31C2B4DYI2 1134 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 RBAK-RBAKDNI3L0D1 243 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 PIK3CDO00329 1044 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 MEIS2O14770 477 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 SLC27A2O14975 620 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 LGR5O75473 907 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 GJB5O95377 273 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 RSPH10BP0C881 870 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 CALM1P0DP23 149 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 CALM2P0DP24 149 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 CALM3P0DP25 149 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 RXRAP19793 462 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 SMARCA1P28370 1054 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 SP4Q02446 784 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 TFF2Q03403 129 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 FAM117BQ6P1L5 589 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 SPRED2Q7Z698 418 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 TRIM50Q86XT4 487 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
CNIH1-202ENST00000395573 SRBD1Q8N5C6 995 aaKnown RBP12.7□□□□□ -0.38
CNIH1-202ENST00000395573 RAD9AQ99638 391 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 GPR20Q99678 358 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 ANO2Q9NQ90 1003 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 ZNF215Q9UL58 517 aaPredicted RBP12.7□□□□□ -0.38
CNIH1-202ENST00000395573 MYO7AQ13402 2215 aa12.7□□□□□ -0.38
CNIH1-202ENST00000395573 TREHO43280 583 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 HOXC8P31273 242 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 LIFRP42702 1097 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 GRB10Q13322 594 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 COL9A3Q14050 684 aaPredicted RBP12.69□□□□□ -0.38
CNIH1-202ENST00000395573 AAK1Q2M2I8 961 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 UTP14CQ5TAP6 766 aaKnown RBP12.69□□□□□ -0.38
CNIH1-202ENST00000395573 CREB3L3Q68CJ9 461 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 XRRA1Q6P2D8 792 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 NLRX1Q86UT6 975 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 RAB11FIP4Q86YS3 637 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 GDPD5Q8WTR4 605 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 UHRF1Q96T88 793 aaPredicted RBP12.69□□□□□ -0.38
CNIH1-202ENST00000395573 LRRC2Q9BYS8 371 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 RNPEPQ9H4A4 650 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 MTUS1Q9ULD2 1270 aa12.69□□□□□ -0.38
CNIH1-202ENST00000395573 FNDC1Q4ZHG4 1894 aaPredicted RBP12.69□□□□□ -0.38
CNIH1-202ENST00000395573 hCG_1642624A0A1W2PR95 340 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 AMHP03971 560 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 CTSHP09668 335 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 GNAT1P11488 350 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 UBE2SQ16763 222 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.68□□□□□ -0.383e-7■■□□□ 13.2
CNIH1-202ENST00000395573 MYOCDQ8IZQ8 938 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 CCDC82Q8N4S0 544 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 GIMAP8Q8ND71 665 aaPredicted RBP12.68□□□□□ -0.38
CNIH1-202ENST00000395573 DBF4BQ8NFT6 615 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 TGS1Q96RS0 853 aaKnown RBP12.68□□□□□ -0.38
CNIH1-202ENST00000395573 SENP7Q9BQF6 1050 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 PSTPIP2Q9H939 334 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 SETD4Q9NVD3 440 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 TELO2Q9Y4R8 837 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 SLC12A7Q9Y666 1083 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 PLXNA4Q9HCM2 1894 aa12.68□□□□□ -0.38
CNIH1-202ENST00000395573 COL4A6Q14031 1691 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 LINC01553A4QN01 128 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 LPXNO60711 386 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 CAND2O75155 1236 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 KCNQ1P51787 676 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 ARHGAP4P98171 946 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 NECTIN1Q15223 517 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 PLEKHG4Q58EX7 1191 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 TMTC3Q6ZXV5 915 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 MICU3Q86XE3 530 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 FANCBQ8NB91 859 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 LMBR1Q8WVP7 490 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 SEPT8Q92599 483 aa12.67□□□□□ -0.38
CNIH1-202ENST00000395573 GPRASP2Q96D09 838 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms