RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ANKRD20A1Q5TYW2 823 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 CHMP6Q96FZ7 201 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 PITPNM3Q9BZ71 974 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 ANAPC5Q9UJX4 755 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 PTPN22Q9Y2R2 807 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 SPATA31D1Q6ZQQ2 1576 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 PLEKHG2Q9H7P9 1386 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 ESRRAP11474 423 aaPredicted RBP21.31■■□□□ 1
SHANK1-203ENST00000391813 HAUS1Q96CS2 278 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 PCDHA4Q9UN74 947 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 PNPLA6Q8IY17 1366 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 AOC3Q16853 763 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 PUS3Q9BZE2 481 aaKnown RBP21.31■■□□□ 1
SHANK1-203ENST00000391813 DIP2AQ14689 1571 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 GOLGA8QA0A0J9YX86 632 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 GOLGA8OA6NCC3 632 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 GOLGA8NF8WBI6 632 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 SEMA3FQ13275 785 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 CERKLQ49MI3 558 aaPredicted RBP21.31■■□□□ 1
SHANK1-203ENST00000391813 RDH13Q8NBN7 331 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 KLRF2D3W0D1 207 aa21.3■■□□□ 1
SHANK1-203ENST00000391813 NME8Q8N427 588 aa21.3■■□□□ 1
SHANK1-203ENST00000391813 TRIM11Q96F44 468 aa21.3■■□□□ 1
SHANK1-203ENST00000391813 EPN3Q9H201 632 aa21.3■■□□□ 1
SHANK1-203ENST00000391813 OSBPL9Q96SU4 736 aa21.3■■□□□ 1
SHANK1-203ENST00000391813 CHGBP05060 677 aa21.3■■□□□ 1
SHANK1-203ENST00000391813 MAGOHP61326 146 aaKnown RBP21.3■■□□□ 1
SHANK1-203ENST00000391813 RCN2Q14257 317 aa21.3■■□□□ 1
SHANK1-203ENST00000391813 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.3■■□□□ 1
SHANK1-203ENST00000391813 CAPN12Q6ZSI9 719 aa21.3■■□□□ 1
SHANK1-203ENST00000391813 FAM178BQ8IXR5 827 aa21.3■■□□□ 1
SHANK1-203ENST00000391813 TTLL11Q8NHH1 800 aa21.3■■□□□ 1
SHANK1-203ENST00000391813 DRC3Q9H069 523 aa21.3■■□□□ 1
SHANK1-203ENST00000391813 TCP10L2B9ZVM9 353 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 BIRC2Q13490 618 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 BEND6Q5SZJ8 279 aaPredicted RBP21.29■■□□□ 1
SHANK1-203ENST00000391813 ALKBH5Q6P6C2 394 aaKnown RBP21.29■■□□□ 1
SHANK1-203ENST00000391813 ZNF354CQ86Y25 554 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 FAM133AQ8N9E0 248 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 GEMIN8Q9NWZ8 242 aaKnown RBP21.29■■□□□ 1
SHANK1-203ENST00000391813 RASSF10A6NK89 507 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 ATF7P17544 494 aaPredicted RBP21.29■■□□□ 1
SHANK1-203ENST00000391813 NT5C2P49902 561 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 BPIFB4P59827 614 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 DEUP1Q05D60 604 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 KIF22Q14807 665 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 PRPF3O43395 683 aaKnown RBP21.29■■□□□ 1
SHANK1-203ENST00000391813 SLC8A3P57103 927 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 YWHAEP62258 255 aaKnown RBP21.29■■□□□ 1
SHANK1-203ENST00000391813 TMED2Q15363 201 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 ARHGEF1Q92888 912 aaKnown RBP21.29■■□□□ 1
SHANK1-203ENST00000391813 ABTB1Q969K4 478 aaPredicted RBP21.29■■□□□ 1
SHANK1-203ENST00000391813 TAF1DQ9H5J8 278 aaPredicted RBP21.29■■□□□ 1
SHANK1-203ENST00000391813 NRXN1Q9ULB1 1477 aa21.29■■□□□ 1
SHANK1-203ENST00000391813 QRICH2Q9H0J4 1663 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 TSGA10IPQ3SY00 556 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 NSMFQ6X4W1 530 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 CPXCR1Q8N123 301 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 EPS15L1Q9UBC2 864 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 WDR19Q8NEZ3 1342 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 CD19P15391 556 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 C1orf112Q9NSG2 853 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 ADAMTS1Q9UHI8 967 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 CDHR2Q9BYE9 1310 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 STK36Q9NRP7 1315 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 SASH1O94885 1247 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 H2AFXP16104 143 aaPredicted RBP21.28■■□□□ 1
SHANK1-203ENST00000391813 NR1H3Q13133 447 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 ZNF449Q6P9G9 518 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 GPKOWQ92917 476 aaPredicted RBP eCLIP21.28■■□□□ 1
SHANK1-203ENST00000391813 RFX7Q2KHR2 1363 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 RPAP1Q9BWH6 1393 aaPredicted RBP21.28■■□□□ 1
SHANK1-203ENST00000391813 A0A1W2PQC6 194 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 USP17L3A6NCW0 530 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 USP17L4A6NCW7 530 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 M0R2C6 588 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 NSFP46459 744 aaKnown RBP21.28■■□□□ 1
SHANK1-203ENST00000391813 CYP4F22Q6NT55 531 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 USP17L1Q7RTZ2 530 aa21.28■■□□□ 1
SHANK1-203ENST00000391813 DHX36Q9H2U1 1008 aaKnown RBP21.28■■□□□ 1
SHANK1-203ENST00000391813 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.28■■□□□ 1
SHANK1-203ENST00000391813 SPATA31A5Q5VU36 1347 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 SPATA31A7Q8IWB4 1347 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 CA4P22748 312 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 SPARCL1Q14515 664 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 ZC3H18Q86VM9 953 aaKnown RBP21.27■■□□□ 1
SHANK1-203ENST00000391813 PPM1KQ8N3J5 372 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 AP1M1Q9BXS5 423 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 MYO3BQ8WXR4 1341 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 EXOC1LA0A1B0GW35 172 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 GSPT2Q8IYD1 628 aaKnown RBP21.27■■□□□ 1
SHANK1-203ENST00000391813 OSBP2Q969R2 916 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 SPON1Q9HCB6 807 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 SPECC1L-ADORA2AF8WAN1 911 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 FBXW10Q5XX13 1052 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 TPH2Q8IWU9 490 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 TMEM60Q9H2L4 133 aa21.27■■□□□ 1
SHANK1-203ENST00000391813 BRD2P25440 801 aaKnown RBP21.27■□□□□ 0.99
SHANK1-203ENST00000391813 SPATA4Q8NEY3 305 aa21.27■□□□□ 0.99
SHANK1-203ENST00000391813 EFHD1Q9BUP0 239 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms