RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 PCDHGA11Q9Y5H2 935 aa5.84□□□□□ -1.47
TRAV16-201ENST00000390444 MRVI1Q9Y6F6 885 aa5.84□□□□□ -1.47
TRAV16-201ENST00000390444 MYH9P35579 1960 aaKnown RBP5.84□□□□□ -1.48
TRAV16-201ENST00000390444 MGAMO43451 1857 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 RPTORQ8N122 1335 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 VWA3AA6NCI4 1184 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 SPDYE3A6NKU9 549 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 GCOM1H8Y6P7 765 aaPredicted RBP5.83□□□□□ -1.48
TRAV16-201ENST00000390444 ERVH48-1M5A8F1 160 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 VWA5AO00534 786 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 CXCL11O14625 94 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 TBX3O15119 743 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 SLC26A4O43511 780 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 CCNT1O60563 726 aaKnown RBP5.83□□□□□ -1.48
TRAV16-201ENST00000390444 CAVIN2O95810 425 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 ADH1CP00326 375 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 POLR2MP0CAP2 368 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 HOXA7P31268 230 aaPredicted RBP5.83□□□□□ -1.48
TRAV16-201ENST00000390444 TXLNAP40222 546 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 SNAP25P60880 206 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 ERVK-9P63128 1117 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 ARHGAP4P98171 946 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 DHX9Q08211 1270 aaKnown RBP5.83□□□□□ -1.48
TRAV16-201ENST00000390444 DGKZQ13574 1117 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 COG2Q14746 738 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 IL17AQ16552 155 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 CAMK4Q16566 473 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 TKFCQ3LXA3 575 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 Q4G0T1 1027 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 EAPPQ56P03 285 aaPredicted RBP5.83□□□□□ -1.48
TRAV16-201ENST00000390444 KANK3Q6NY19 840 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 CCDC174Q6PII3 467 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 USP17L6PQ6QN14 398 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 LBX2Q6XYB7 198 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 DTHD1Q6ZMT9 781 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 KRBA2Q6ZNG9 492 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 LIAT1Q6ZQX7 453 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 CATSPERGQ6ZRH7 1159 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 MCF2L2Q86YR7 1114 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 IGSF22Q8N9C0 903 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 CLEC4DQ8WXI8 215 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 EMID1Q96A84 441 aaPredicted RBP5.83□□□□□ -1.48
TRAV16-201ENST00000390444 CCDC34Q96HJ3 373 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 P2RX7Q99572 595 aaKnown RBP5.83□□□□□ -1.48
TRAV16-201ENST00000390444 EHMT1Q9H9B1 1298 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 HOOK1Q9UJC3 728 aaKnown RBP5.83□□□□□ -1.48
TRAV16-201ENST00000390444 MCM3APO60318 1980 aa5.83□□□□□ -1.48
TRAV16-201ENST00000390444 A0A087X0B3 334 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 POLR2DO15514 142 aaKnown RBP5.82□□□□□ -1.48
TRAV16-201ENST00000390444 SLC37A4O43826 429 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 ZBED4O75132 1171 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 TDP2O95551 362 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 SLFN14P0C7P3 912 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 TAL1P17542 331 aaPredicted RBP5.82□□□□□ -1.48
TRAV16-201ENST00000390444 DEKP35659 375 aaKnown RBP5.82□□□□□ -1.48
TRAV16-201ENST00000390444 SCTRP47872 440 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 TYRO3Q06418 890 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 MMRN1Q13201 1228 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 PRKG1Q13976 671 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 ARID5BQ14865 1188 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 CALCRLQ16602 461 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 STX1AQ16623 288 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 TMEM266Q2M3C6 531 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 SPECC1Q5M775 1068 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 NT5DC1Q5TFE4 455 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 PHLDB3Q6NSJ2 640 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 DLK2Q6UY11 383 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 USP49Q70CQ1 688 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 SND1Q7KZF4 910 aaKnown RBP eCLIP5.82□□□□□ -1.48
TRAV16-201ENST00000390444 SLFN12Q8IYM2 578 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 MB21D1Q8N884 522 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 CNNM3Q8NE01 707 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 LENG9Q96B70 501 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 ATG4CQ96DT6 458 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 EPSTI1Q96J88 318 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 AGBL1Q96MI9 1066 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 SDF4Q9BRK5 362 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 TEX13BQ9BXU2 312 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 RAB34Q9BZG1 259 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 RBSNQ9H1K0 784 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 CUEDC2Q9H467 287 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 ELP3Q9H9T3 547 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 MAGEF1Q9HAY2 307 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 KCNMB3Q9NPA1 279 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 HOXC10Q9NYD6 342 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 DDX25Q9UHL0 483 aaKnown RBP5.82□□□□□ -1.48
TRAV16-201ENST00000390444 TUBE1Q9UJT0 475 aa5.82□□□□□ -1.48
TRAV16-201ENST00000390444 ZNF214Q9UL59 606 aaPredicted RBP5.82□□□□□ -1.48
TRAV16-201ENST00000390444 IGLV3-22A0A075B6J6 115 aa5.81□□□□□ -1.48
TRAV16-201ENST00000390444 SFI1A8K8P3 1242 aa5.81□□□□□ -1.48
TRAV16-201ENST00000390444 NFIBO00712 420 aa5.81□□□□□ -1.48
TRAV16-201ENST00000390444 CFBP00751 764 aa5.81□□□□□ -1.48
TRAV16-201ENST00000390444 MYL1P05976 194 aa5.81□□□□□ -1.48
TRAV16-201ENST00000390444 ALAS1P13196 640 aa5.81□□□□□ -1.48
TRAV16-201ENST00000390444 HOXA13P31271 388 aaPredicted RBP5.81□□□□□ -1.48
TRAV16-201ENST00000390444 SETQ01105 290 aaPredicted RBP5.81□□□□□ -1.48
TRAV16-201ENST00000390444 PABPC4Q13310 644 aaKnown RBP eCLIP5.81□□□□□ -1.48
TRAV16-201ENST00000390444 MOGSQ13724 837 aa5.81□□□□□ -1.48
TRAV16-201ENST00000390444 PDIA5Q14554 519 aa5.81□□□□□ -1.48
TRAV16-201ENST00000390444 TMEM132BQ14DG7 1078 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms