RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 SPAG5Q96R06 1193 aa17.89■□□□□ 0.45
TNIP1-202ENST00000389378 CELF4Q9BZC1 486 aaKnown RBP17.89■□□□□ 0.45
TNIP1-202ENST00000389378 RAB34Q9BZG1 259 aa17.89■□□□□ 0.45
TNIP1-202ENST00000389378 DPH5Q9H2P9 285 aa17.89■□□□□ 0.45
TNIP1-202ENST00000389378 RIC8AQ9NPQ8 531 aa17.89■□□□□ 0.45
TNIP1-202ENST00000389378 PCDHGC5Q9Y5F6 944 aa17.89■□□□□ 0.45
TNIP1-202ENST00000389378 FXR2P51116 673 aaKnown RBP eCLIP17.88■□□□□ 0.457e-6■■■■□ 23.7
TNIP1-202ENST00000389378 KCNH2Q12809 1159 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 QPCTQ16769 361 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 ZNF571Q7Z3V5 609 aaPredicted RBP17.88■□□□□ 0.45
TNIP1-202ENST00000389378 WHAMMQ8TF30 809 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 RNF14Q9UBS8 474 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 PHLPP1O60346 1717 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 POTEB3A0JP26 581 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 POTECB2RU33 542 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 SART1O43290 800 aaKnown RBP17.88■□□□□ 0.45
TNIP1-202ENST00000389378 DAPK3O43293 454 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 STAT3P40763 770 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 ZCWPW2Q504Y3 356 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 POTEBQ6S5H4 581 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 DHX37Q8IY37 1157 aaKnown RBP17.88■□□□□ 0.45
TNIP1-202ENST00000389378 SETDB2Q96T68 719 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 ANKRD2Q9GZV1 360 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 DDX25Q9UHL0 483 aaKnown RBP17.88■□□□□ 0.45
TNIP1-202ENST00000389378 FBXL5Q9UKA1 691 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 KIAA1551Q9HCM1 1747 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 ACTN3Q08043 901 aaPredicted RBP17.88■□□□□ 0.45
TNIP1-202ENST00000389378 PICALMQ13492 652 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 DCAF17Q5H9S7 520 aaPredicted RBP17.88■□□□□ 0.45
TNIP1-202ENST00000389378 TCERG1LQ5VWI1 586 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 CEP89Q96ST8 783 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 BCAS3Q9H6U6 928 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 TMBIM4Q9HC24 238 aa17.88■□□□□ 0.45
TNIP1-202ENST00000389378 NOVA2Q9UNW9 492 aaKnown RBP17.88■□□□□ 0.45
TNIP1-202ENST00000389378 SLURP2P0DP57 97 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 ECHS1P30084 290 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 TTBK2Q6IQ55 1244 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 GJB7Q6PEY0 223 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 GPBP1Q86WP2 473 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 HAS1Q92839 578 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 CYFIP2Q96F07 1278 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 MYCBPQ99417 103 aaPredicted RBP17.87■□□□□ 0.45
TNIP1-202ENST00000389378 HMGB1P1B2RPK0 211 aaPredicted RBP17.87■□□□□ 0.45
TNIP1-202ENST00000389378 KIF4AO95239 1232 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 COPB2P35606 906 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 CASP5P51878 434 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 CLEC4GQ6UXB4 293 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 MICALCLQ6ZW33 695 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 TRIM59Q8IWR1 403 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 CCDC13Q8IYE1 715 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 SCFD1Q8WVM8 642 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 BMP2KQ9NSY1 1161 aaPredicted RBP17.87■□□□□ 0.45
TNIP1-202ENST00000389378 CNOT8Q9UFF9 292 aaKnown RBP17.87■□□□□ 0.45
TNIP1-202ENST00000389378 PCDHA12Q9UN75 941 aa17.87■□□□□ 0.45
TNIP1-202ENST00000389378 KRIT1O00522 736 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 FAM107AO95990 144 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 HSPA9P38646 679 aaKnown RBP17.86■□□□□ 0.45
TNIP1-202ENST00000389378 ZNF844Q08AG5 666 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 METTL13Q8N6R0 699 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 EMILIN3Q9NT22 766 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 MEIS1O00470 390 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 PDHBP11177 359 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 NR2F2P24468 414 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 SETQ01105 290 aaPredicted RBP17.86■□□□□ 0.45
TNIP1-202ENST00000389378 PTF1AQ7RTS3 328 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 CCDC91Q7Z6B0 441 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 MREGQ8N565 214 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 NEDD1Q8NHV4 660 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 ISCUQ9H1K1 167 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 YY1AP1Q9H869 796 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 SCN7AQ01118 1682 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 ABCB11O95342 1321 aa17.86■□□□□ 0.45
TNIP1-202ENST00000389378 TTI1O43156 1089 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 FSBPO95073 299 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 PRPF4BQ13523 1007 aaKnown RBP17.85■□□□□ 0.45
TNIP1-202ENST00000389378 PROM2Q8N271 834 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 MDM1Q8TC05 714 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 CCDC114Q96M63 670 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 EDEM3Q9BZQ6 932 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 NOC2LQ9Y3T9 749 aaKnown RBP17.85■□□□□ 0.45
TNIP1-202ENST00000389378 LAMB1P07942 1786 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 A6NNZ2 444 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 PHF20L1A8MW92 1017 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 PLA2G4BP0C869 781 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 USP8P40818 1118 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 TUBB8Q3ZCM7 444 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 TMEM119Q4V9L6 283 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 SWT1Q5T5J6 900 aaKnown RBP17.85■□□□□ 0.45
TNIP1-202ENST00000389378 ALKBH5Q6P6C2 394 aaKnown RBP17.85■□□□□ 0.45
TNIP1-202ENST00000389378 CD302Q8IX05 232 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 WDR66Q8TBY9 1149 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 DDX20Q9UHI6 824 aaKnown RBP17.85■□□□□ 0.45
TNIP1-202ENST00000389378 MYH4Q9Y623 1939 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 GOLGA6L7A0A1B0GV03 622 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 MAP2K2P36507 400 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 PSMD2Q13200 908 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 CCDC121Q6ZUS5 278 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 NUCKS1Q9H1E3 243 aaKnown RBP17.85■□□□□ 0.45
TNIP1-202ENST00000389378 GANQ9H2C0 597 aa17.85■□□□□ 0.45
TNIP1-202ENST00000389378 IKZF4Q9H2S9 585 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms